Protein–RNA interactions for Protein: Q9ULS5

TMCC3, Transmembrane and coiled-coil domain protein 3, humanhuman

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMCC3Q9ULS5 AC139713.2-201ENST00000641328 2723 ntBASIC16.9■□□□□ 0.3
TMCC3Q9ULS5 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TMCC3Q9ULS5 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TMCC3Q9ULS5 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
TMCC3Q9ULS5 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC16.9■□□□□ 0.3
TMCC3Q9ULS5 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
TMCC3Q9ULS5 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
TMCC3Q9ULS5 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC16.9■□□□□ 0.3
TMCC3Q9ULS5 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
TMCC3Q9ULS5 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
TMCC3Q9ULS5 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
TMCC3Q9ULS5 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
TMCC3Q9ULS5 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC16.89■□□□□ 0.3
TMCC3Q9ULS5 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
TMCC3Q9ULS5 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
TMCC3Q9ULS5 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TMCC3Q9ULS5 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
TMCC3Q9ULS5 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TMCC3Q9ULS5 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
TMCC3Q9ULS5 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
TMCC3Q9ULS5 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TMCC3Q9ULS5 ESRRAP1-201ENST00000400596 1257 ntBASIC16.89■□□□□ 0.29
TMCC3Q9ULS5 MCCD1P1-208ENST00000445732 328 ntBASIC16.89■□□□□ 0.29
TMCC3Q9ULS5 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC16.89■□□□□ 0.29
TMCC3Q9ULS5 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC16.89■□□□□ 0.29
TMCC3Q9ULS5 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC16.89■□□□□ 0.29
TMCC3Q9ULS5 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC16.89■□□□□ 0.29
TMCC3Q9ULS5 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
TMCC3Q9ULS5 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TMCC3Q9ULS5 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC16.89■□□□□ 0.29
TMCC3Q9ULS5 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TMCC3Q9ULS5 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
TMCC3Q9ULS5 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
TMCC3Q9ULS5 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TMCC3Q9ULS5 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
TMCC3Q9ULS5 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC16.88■□□□□ 0.29
TMCC3Q9ULS5 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TMCC3Q9ULS5 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC16.88■□□□□ 0.29
TMCC3Q9ULS5 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
TMCC3Q9ULS5 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC16.88■□□□□ 0.29
TMCC3Q9ULS5 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC16.88■□□□□ 0.29
TMCC3Q9ULS5 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC16.88■□□□□ 0.29
TMCC3Q9ULS5 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
TMCC3Q9ULS5 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TMCC3Q9ULS5 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC16.88■□□□□ 0.29
TMCC3Q9ULS5 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TMCC3Q9ULS5 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC16.88■□□□□ 0.29
TMCC3Q9ULS5 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
TMCC3Q9ULS5 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC16.88■□□□□ 0.29
TMCC3Q9ULS5 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC16.88■□□□□ 0.29
TMCC3Q9ULS5 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
TMCC3Q9ULS5 AC008040.2-201ENST00000461049 708 ntBASIC16.88■□□□□ 0.29
TMCC3Q9ULS5 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC16.88■□□□□ 0.29
TMCC3Q9ULS5 FDX2-207ENST00000494368 584 ntTSL 4 BASIC16.88■□□□□ 0.29
TMCC3Q9ULS5 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC16.88■□□□□ 0.29
TMCC3Q9ULS5 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
TMCC3Q9ULS5 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TMCC3Q9ULS5 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TMCC3Q9ULS5 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TMCC3Q9ULS5 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TMCC3Q9ULS5 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
TMCC3Q9ULS5 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
TMCC3Q9ULS5 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC16.88■□□□□ 0.29
TMCC3Q9ULS5 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TMCC3Q9ULS5 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC16.88■□□□□ 0.29
TMCC3Q9ULS5 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC16.88■□□□□ 0.29
TMCC3Q9ULS5 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC16.88■□□□□ 0.29
TMCC3Q9ULS5 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC16.87■□□□□ 0.29
TMCC3Q9ULS5 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC16.87■□□□□ 0.29
TMCC3Q9ULS5 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
TMCC3Q9ULS5 PHGDH-209ENST00000641074 1780 ntBASIC16.87■□□□□ 0.29
TMCC3Q9ULS5 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
TMCC3Q9ULS5 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
TMCC3Q9ULS5 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
TMCC3Q9ULS5 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
TMCC3Q9ULS5 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TMCC3Q9ULS5 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TMCC3Q9ULS5 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TMCC3Q9ULS5 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
TMCC3Q9ULS5 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
TMCC3Q9ULS5 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
TMCC3Q9ULS5 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
TMCC3Q9ULS5 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
TMCC3Q9ULS5 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC16.87■□□□□ 0.29
TMCC3Q9ULS5 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC16.87■□□□□ 0.29
TMCC3Q9ULS5 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC16.87■□□□□ 0.29
TMCC3Q9ULS5 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC16.87■□□□□ 0.29
TMCC3Q9ULS5 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
TMCC3Q9ULS5 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC16.87■□□□□ 0.29
TMCC3Q9ULS5 MIR6786-201ENST00000616843 113 ntBASIC16.87■□□□□ 0.29
TMCC3Q9ULS5 TBCB-214ENST00000629269 413 ntTSL 5 BASIC16.87■□□□□ 0.29
TMCC3Q9ULS5 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
TMCC3Q9ULS5 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TMCC3Q9ULS5 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC16.87■□□□□ 0.29
TMCC3Q9ULS5 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC16.87■□□□□ 0.29
TMCC3Q9ULS5 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
TMCC3Q9ULS5 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TMCC3Q9ULS5 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TMCC3Q9ULS5 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC16.87■□□□□ 0.29
TMCC3Q9ULS5 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC16.87■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms