Protein–RNA interactions for Protein: Q9UBL6

CPNE7, Copine-7, humanhuman

Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE7Q9UBL6 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC17.6■□□□□ 0.41
CPNE7Q9UBL6 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CPNE7Q9UBL6 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CPNE7Q9UBL6 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CPNE7Q9UBL6 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CPNE7Q9UBL6 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CPNE7Q9UBL6 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC17.6■□□□□ 0.41
CPNE7Q9UBL6 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC17.6■□□□□ 0.41
CPNE7Q9UBL6 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC17.6■□□□□ 0.41
CPNE7Q9UBL6 TBCB-205ENST00000585746 875 ntTSL 3 BASIC17.6■□□□□ 0.41
CPNE7Q9UBL6 AC138894.3-201ENST00000603787 634 ntBASIC17.6■□□□□ 0.41
CPNE7Q9UBL6 AL353801.3-201ENST00000609898 542 ntBASIC17.6■□□□□ 0.41
CPNE7Q9UBL6 AC009154.2-201ENST00000621177 724 ntBASIC17.6■□□□□ 0.41
CPNE7Q9UBL6 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CPNE7Q9UBL6 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CPNE7Q9UBL6 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CPNE7Q9UBL6 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
CPNE7Q9UBL6 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
CPNE7Q9UBL6 ESPNP-201ENST00000270691 2015 ntBASIC17.6■□□□□ 0.41
CPNE7Q9UBL6 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CPNE7Q9UBL6 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC17.6■□□□□ 0.41
CPNE7Q9UBL6 AC098818.2-201ENST00000564925 2320 ntBASIC17.6■□□□□ 0.41
CPNE7Q9UBL6 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CPNE7Q9UBL6 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CPNE7Q9UBL6 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
CPNE7Q9UBL6 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CPNE7Q9UBL6 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC17.59■□□□□ 0.41
CPNE7Q9UBL6 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC17.59■□□□□ 0.41
CPNE7Q9UBL6 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CPNE7Q9UBL6 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
CPNE7Q9UBL6 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CPNE7Q9UBL6 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC17.59■□□□□ 0.41
CPNE7Q9UBL6 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC17.59■□□□□ 0.41
CPNE7Q9UBL6 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC17.59■□□□□ 0.41
CPNE7Q9UBL6 NSUN5P1-202ENST00000421140 1535 ntBASIC17.59■□□□□ 0.41
CPNE7Q9UBL6 NSUN5P2-203ENST00000457352 1529 ntBASIC17.59■□□□□ 0.41
CPNE7Q9UBL6 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC17.59■□□□□ 0.41
CPNE7Q9UBL6 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CPNE7Q9UBL6 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
CPNE7Q9UBL6 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CPNE7Q9UBL6 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CPNE7Q9UBL6 KIRREL3-AS3-201ENST00000404882 831 ntBASIC17.59■□□□□ 0.41
CPNE7Q9UBL6 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC17.59■□□□□ 0.41
CPNE7Q9UBL6 AC068472.1-201ENST00000474589 881 ntBASIC17.59■□□□□ 0.41
CPNE7Q9UBL6 AC091304.2-201ENST00000564639 760 ntBASIC17.59■□□□□ 0.41
CPNE7Q9UBL6 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC17.59■□□□□ 0.41
CPNE7Q9UBL6 AL732292.2-201ENST00000609649 430 ntBASIC17.59■□□□□ 0.41
CPNE7Q9UBL6 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CPNE7Q9UBL6 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC17.59■□□□□ 0.41
CPNE7Q9UBL6 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CPNE7Q9UBL6 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CPNE7Q9UBL6 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
CPNE7Q9UBL6 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CPNE7Q9UBL6 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
CPNE7Q9UBL6 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC17.58■□□□□ 0.41
CPNE7Q9UBL6 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
CPNE7Q9UBL6 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CPNE7Q9UBL6 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
CPNE7Q9UBL6 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC17.58■□□□□ 0.41
CPNE7Q9UBL6 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
CPNE7Q9UBL6 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
CPNE7Q9UBL6 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC17.58■□□□□ 0.4
CPNE7Q9UBL6 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
CPNE7Q9UBL6 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CPNE7Q9UBL6 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CPNE7Q9UBL6 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC17.58■□□□□ 0.4
CPNE7Q9UBL6 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC17.58■□□□□ 0.4
CPNE7Q9UBL6 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC17.58■□□□□ 0.4
CPNE7Q9UBL6 MINOS1P3-201ENST00000457048 203 ntBASIC17.58■□□□□ 0.4
CPNE7Q9UBL6 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CPNE7Q9UBL6 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CPNE7Q9UBL6 UNC93B7-201ENST00000509439 705 ntBASIC17.58■□□□□ 0.4
CPNE7Q9UBL6 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC17.58■□□□□ 0.4
CPNE7Q9UBL6 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC17.58■□□□□ 0.4
CPNE7Q9UBL6 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
CPNE7Q9UBL6 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CPNE7Q9UBL6 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC17.58■□□□□ 0.4
CPNE7Q9UBL6 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC17.58■□□□□ 0.4
CPNE7Q9UBL6 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
CPNE7Q9UBL6 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
CPNE7Q9UBL6 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
CPNE7Q9UBL6 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
CPNE7Q9UBL6 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CPNE7Q9UBL6 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC17.58■□□□□ 0.4
CPNE7Q9UBL6 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
CPNE7Q9UBL6 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CPNE7Q9UBL6 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC17.57■□□□□ 0.4
CPNE7Q9UBL6 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC17.57■□□□□ 0.4
CPNE7Q9UBL6 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC17.57■□□□□ 0.4
CPNE7Q9UBL6 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
CPNE7Q9UBL6 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CPNE7Q9UBL6 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CPNE7Q9UBL6 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC17.57■□□□□ 0.4
CPNE7Q9UBL6 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
CPNE7Q9UBL6 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CPNE7Q9UBL6 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC17.57■□□□□ 0.4
CPNE7Q9UBL6 BET1L-206ENST00000486280 665 ntTSL 3 BASIC17.57■□□□□ 0.4
CPNE7Q9UBL6 KRT18P31-201ENST00000506277 1292 ntBASIC17.57■□□□□ 0.4
CPNE7Q9UBL6 CDV3-207ENST00000508481 661 ntTSL 3 BASIC17.57■□□□□ 0.4
CPNE7Q9UBL6 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC17.57■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms