Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC20.5■□□□□ 0.87
COL20A1Q9P218 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC20.5■□□□□ 0.87
COL20A1Q9P218 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC20.5■□□□□ 0.87
COL20A1Q9P218 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC20.5■□□□□ 0.87
COL20A1Q9P218 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC20.5■□□□□ 0.87
COL20A1Q9P218 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC20.5■□□□□ 0.87
COL20A1Q9P218 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
COL20A1Q9P218 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC20.5■□□□□ 0.87
COL20A1Q9P218 SP100-208ENST00000427101 1922 ntTSL 2 BASIC20.5■□□□□ 0.87
COL20A1Q9P218 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC20.5■□□□□ 0.87
COL20A1Q9P218 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
COL20A1Q9P218 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
COL20A1Q9P218 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC20.5■□□□□ 0.87
COL20A1Q9P218 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
COL20A1Q9P218 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
COL20A1Q9P218 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
COL20A1Q9P218 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC20.5■□□□□ 0.87
COL20A1Q9P218 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
COL20A1Q9P218 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
COL20A1Q9P218 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC20.5■□□□□ 0.87
COL20A1Q9P218 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
COL20A1Q9P218 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC20.5■□□□□ 0.87
COL20A1Q9P218 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC20.49■□□□□ 0.87
COL20A1Q9P218 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
COL20A1Q9P218 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
COL20A1Q9P218 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
COL20A1Q9P218 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC20.49■□□□□ 0.87
COL20A1Q9P218 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
COL20A1Q9P218 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
COL20A1Q9P218 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
COL20A1Q9P218 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
COL20A1Q9P218 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
COL20A1Q9P218 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
COL20A1Q9P218 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC20.49■□□□□ 0.87
COL20A1Q9P218 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
COL20A1Q9P218 AP000347.1-202ENST00000435868 847 ntBASIC20.49■□□□□ 0.87
COL20A1Q9P218 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC20.49■□□□□ 0.87
COL20A1Q9P218 AC106795.1-205ENST00000512851 1056 ntBASIC20.49■□□□□ 0.87
COL20A1Q9P218 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC20.49■□□□□ 0.87
COL20A1Q9P218 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC20.49■□□□□ 0.87
COL20A1Q9P218 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC20.49■□□□□ 0.87
COL20A1Q9P218 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
COL20A1Q9P218 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC20.49■□□□□ 0.87
COL20A1Q9P218 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
COL20A1Q9P218 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC20.49■□□□□ 0.87
COL20A1Q9P218 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
COL20A1Q9P218 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC20.49■□□□□ 0.87
COL20A1Q9P218 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
COL20A1Q9P218 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
COL20A1Q9P218 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
COL20A1Q9P218 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC20.49■□□□□ 0.87
COL20A1Q9P218 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
COL20A1Q9P218 INTS4P1-201ENST00000438455 1935 ntBASIC20.49■□□□□ 0.87
COL20A1Q9P218 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
COL20A1Q9P218 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
COL20A1Q9P218 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC20.49■□□□□ 0.87
COL20A1Q9P218 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
COL20A1Q9P218 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
COL20A1Q9P218 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
COL20A1Q9P218 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
COL20A1Q9P218 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
COL20A1Q9P218 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC20.48■□□□□ 0.87
COL20A1Q9P218 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
COL20A1Q9P218 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
COL20A1Q9P218 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
COL20A1Q9P218 THAP5-204ENST00000438865 868 ntTSL 2 BASIC20.48■□□□□ 0.87
COL20A1Q9P218 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC20.48■□□□□ 0.87
COL20A1Q9P218 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC20.48■□□□□ 0.87
COL20A1Q9P218 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
COL20A1Q9P218 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
COL20A1Q9P218 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
COL20A1Q9P218 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC20.48■□□□□ 0.87
COL20A1Q9P218 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
COL20A1Q9P218 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC20.48■□□□□ 0.87
COL20A1Q9P218 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
COL20A1Q9P218 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
COL20A1Q9P218 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC20.48■□□□□ 0.87
COL20A1Q9P218 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
COL20A1Q9P218 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
COL20A1Q9P218 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC20.47■□□□□ 0.87
COL20A1Q9P218 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
COL20A1Q9P218 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
COL20A1Q9P218 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
COL20A1Q9P218 MED16-201ENST00000269814 1199 ntTSL 5 BASIC20.47■□□□□ 0.87
COL20A1Q9P218 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
COL20A1Q9P218 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
COL20A1Q9P218 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
COL20A1Q9P218 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC20.47■□□□□ 0.87
COL20A1Q9P218 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC20.47■□□□□ 0.87
COL20A1Q9P218 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC20.47■□□□□ 0.87
COL20A1Q9P218 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC20.47■□□□□ 0.87
COL20A1Q9P218 AC009533.2-201ENST00000543664 586 ntBASIC20.47■□□□□ 0.87
COL20A1Q9P218 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC20.47■□□□□ 0.87
COL20A1Q9P218 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC20.47■□□□□ 0.87
COL20A1Q9P218 AC011467.2-201ENST00000598425 242 ntBASIC20.47■□□□□ 0.87
COL20A1Q9P218 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
COL20A1Q9P218 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
COL20A1Q9P218 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC20.47■□□□□ 0.87
COL20A1Q9P218 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
COL20A1Q9P218 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 46.9 ms