Protein–RNA interactions for Protein: Q9NUV7

SPTLC3, Serine palmitoyltransferase 3, humanhuman

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC3Q9NUV7 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SPTLC3Q9NUV7 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC20.05■□□□□ 0.8
SPTLC3Q9NUV7 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC20.05■□□□□ 0.8
SPTLC3Q9NUV7 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SPTLC3Q9NUV7 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
SPTLC3Q9NUV7 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC20.05■□□□□ 0.8
SPTLC3Q9NUV7 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC20.05■□□□□ 0.8
SPTLC3Q9NUV7 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC20.05■□□□□ 0.8
SPTLC3Q9NUV7 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC20.05■□□□□ 0.8
SPTLC3Q9NUV7 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC20.05■□□□□ 0.8
SPTLC3Q9NUV7 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
SPTLC3Q9NUV7 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
SPTLC3Q9NUV7 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
SPTLC3Q9NUV7 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SPTLC3Q9NUV7 BOC-212ENST00000485230 2173 ntTSL 2 BASIC20.05■□□□□ 0.8
SPTLC3Q9NUV7 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SPTLC3Q9NUV7 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SPTLC3Q9NUV7 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SPTLC3Q9NUV7 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SPTLC3Q9NUV7 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
SPTLC3Q9NUV7 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC20.05■□□□□ 0.8
SPTLC3Q9NUV7 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SPTLC3Q9NUV7 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC20.04■□□□□ 0.8
SPTLC3Q9NUV7 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC20.04■□□□□ 0.8
SPTLC3Q9NUV7 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SPTLC3Q9NUV7 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
SPTLC3Q9NUV7 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SPTLC3Q9NUV7 KRT8P3-201ENST00000519669 1449 ntBASIC20.04■□□□□ 0.8
SPTLC3Q9NUV7 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SPTLC3Q9NUV7 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SPTLC3Q9NUV7 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SPTLC3Q9NUV7 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SPTLC3Q9NUV7 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC20.04■□□□□ 0.8
SPTLC3Q9NUV7 AGGF1P2-201ENST00000426656 2106 ntBASIC20.04■□□□□ 0.8
SPTLC3Q9NUV7 AC004980.1-204ENST00000429707 299 ntBASIC20.04■□□□□ 0.8
SPTLC3Q9NUV7 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC20.04■□□□□ 0.8
SPTLC3Q9NUV7 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC20.04■□□□□ 0.8
SPTLC3Q9NUV7 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC20.04■□□□□ 0.8
SPTLC3Q9NUV7 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC20.04■□□□□ 0.8
SPTLC3Q9NUV7 AL445675.2-201ENST00000620291 557 ntBASIC20.04■□□□□ 0.8
SPTLC3Q9NUV7 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC20.04■□□□□ 0.8
SPTLC3Q9NUV7 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
SPTLC3Q9NUV7 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SPTLC3Q9NUV7 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC20.04■□□□□ 0.8
SPTLC3Q9NUV7 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC20.04■□□□□ 0.8
SPTLC3Q9NUV7 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
SPTLC3Q9NUV7 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SPTLC3Q9NUV7 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SPTLC3Q9NUV7 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
SPTLC3Q9NUV7 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SPTLC3Q9NUV7 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
SPTLC3Q9NUV7 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SPTLC3Q9NUV7 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC20.04■□□□□ 0.8
SPTLC3Q9NUV7 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SPTLC3Q9NUV7 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SPTLC3Q9NUV7 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
SPTLC3Q9NUV7 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC20.03■□□□□ 0.8
SPTLC3Q9NUV7 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SPTLC3Q9NUV7 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SPTLC3Q9NUV7 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
SPTLC3Q9NUV7 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SPTLC3Q9NUV7 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
SPTLC3Q9NUV7 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC20.03■□□□□ 0.8
SPTLC3Q9NUV7 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
SPTLC3Q9NUV7 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
SPTLC3Q9NUV7 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SPTLC3Q9NUV7 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SPTLC3Q9NUV7 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
SPTLC3Q9NUV7 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC20.03■□□□□ 0.8
SPTLC3Q9NUV7 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
SPTLC3Q9NUV7 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
SPTLC3Q9NUV7 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
SPTLC3Q9NUV7 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
SPTLC3Q9NUV7 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SPTLC3Q9NUV7 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC20.03■□□□□ 0.8
SPTLC3Q9NUV7 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SPTLC3Q9NUV7 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SPTLC3Q9NUV7 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
SPTLC3Q9NUV7 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
SPTLC3Q9NUV7 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
SPTLC3Q9NUV7 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SPTLC3Q9NUV7 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SPTLC3Q9NUV7 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SPTLC3Q9NUV7 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
SPTLC3Q9NUV7 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.8
SPTLC3Q9NUV7 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC20.02■□□□□ 0.8
SPTLC3Q9NUV7 AC138932.1-201ENST00000534164 6830 ntBASIC20.02■□□□□ 0.8
SPTLC3Q9NUV7 AC090340.1-201ENST00000620778 4980 ntBASIC20.02■□□□□ 0.8
SPTLC3Q9NUV7 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC20.02■□□□□ 0.8
SPTLC3Q9NUV7 AC091390.4-202ENST00000476426 537 ntBASIC20.02■□□□□ 0.8
SPTLC3Q9NUV7 PRSS44-201ENST00000515154 1146 ntBASIC20.02■□□□□ 0.8
SPTLC3Q9NUV7 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC20.02■□□□□ 0.8
SPTLC3Q9NUV7 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC20.02■□□□□ 0.8
SPTLC3Q9NUV7 AC124016.1-201ENST00000609552 612 ntBASIC20.02■□□□□ 0.8
SPTLC3Q9NUV7 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC20.02■□□□□ 0.8
SPTLC3Q9NUV7 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC20.02■□□□□ 0.8
SPTLC3Q9NUV7 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.8
SPTLC3Q9NUV7 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
SPTLC3Q9NUV7 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
SPTLC3Q9NUV7 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms