Protein–RNA interactions for Protein: Q9NTX5

ECHDC1, Ethylmalonyl-CoA decarboxylase, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1Q9NTX5 PTK2-216ENST00000519881 863 ntTSL 3 BASIC22.14■■□□□ 1.13
ECHDC1Q9NTX5 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC22.14■■□□□ 1.13
ECHDC1Q9NTX5 RMI2-205ENST00000576027 818 ntTSL 2 BASIC22.14■■□□□ 1.13
ECHDC1Q9NTX5 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC22.14■■□□□ 1.13
ECHDC1Q9NTX5 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
ECHDC1Q9NTX5 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC22.14■■□□□ 1.13
ECHDC1Q9NTX5 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
ECHDC1Q9NTX5 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
ECHDC1Q9NTX5 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC22.14■■□□□ 1.13
ECHDC1Q9NTX5 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC22.14■■□□□ 1.13
ECHDC1Q9NTX5 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
ECHDC1Q9NTX5 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC22.13■■□□□ 1.13
ECHDC1Q9NTX5 AL353692.3-201ENST00000407031 1396 ntBASIC22.13■■□□□ 1.13
ECHDC1Q9NTX5 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC22.13■■□□□ 1.13
ECHDC1Q9NTX5 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC22.13■■□□□ 1.13
ECHDC1Q9NTX5 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC22.13■■□□□ 1.13
ECHDC1Q9NTX5 PXK-206ENST00000463280 2825 ntTSL 2 BASIC22.13■■□□□ 1.13
ECHDC1Q9NTX5 AC007613.1-201ENST00000572811 2597 ntBASIC22.13■■□□□ 1.13
ECHDC1Q9NTX5 AC138028.4-201ENST00000564984 1845 ntBASIC22.13■■□□□ 1.13
ECHDC1Q9NTX5 CD276-201ENST00000318424 2738 ntTSL 5 BASIC22.13■■□□□ 1.13
ECHDC1Q9NTX5 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC22.13■■□□□ 1.13
ECHDC1Q9NTX5 FLJ13224-201ENST00000313737 1514 ntBASIC22.13■■□□□ 1.13
ECHDC1Q9NTX5 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC22.13■■□□□ 1.13
ECHDC1Q9NTX5 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
ECHDC1Q9NTX5 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
ECHDC1Q9NTX5 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC22.13■■□□□ 1.13
ECHDC1Q9NTX5 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC22.13■■□□□ 1.13
ECHDC1Q9NTX5 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC22.13■■□□□ 1.13
ECHDC1Q9NTX5 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC22.13■■□□□ 1.13
ECHDC1Q9NTX5 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC22.13■■□□□ 1.13
ECHDC1Q9NTX5 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC22.13■■□□□ 1.13
ECHDC1Q9NTX5 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
ECHDC1Q9NTX5 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
ECHDC1Q9NTX5 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC22.13■■□□□ 1.13
ECHDC1Q9NTX5 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC22.13■■□□□ 1.13
ECHDC1Q9NTX5 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
ECHDC1Q9NTX5 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC22.13■■□□□ 1.13
ECHDC1Q9NTX5 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
ECHDC1Q9NTX5 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC22.13■■□□□ 1.13
ECHDC1Q9NTX5 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
ECHDC1Q9NTX5 Z83836.1-201ENST00000624605 1642 ntBASIC22.13■■□□□ 1.13
ECHDC1Q9NTX5 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC22.13■■□□□ 1.13
ECHDC1Q9NTX5 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC22.13■■□□□ 1.13
ECHDC1Q9NTX5 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC22.12■■□□□ 1.13
ECHDC1Q9NTX5 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
ECHDC1Q9NTX5 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
ECHDC1Q9NTX5 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC22.12■■□□□ 1.13
ECHDC1Q9NTX5 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
ECHDC1Q9NTX5 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
ECHDC1Q9NTX5 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC22.12■■□□□ 1.13
ECHDC1Q9NTX5 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC22.12■■□□□ 1.13
ECHDC1Q9NTX5 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC22.12■■□□□ 1.13
ECHDC1Q9NTX5 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
ECHDC1Q9NTX5 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
ECHDC1Q9NTX5 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC22.12■■□□□ 1.13
ECHDC1Q9NTX5 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
ECHDC1Q9NTX5 FXN-203ENST00000396366 922 ntTSL 2 BASIC22.12■■□□□ 1.13
ECHDC1Q9NTX5 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC22.12■■□□□ 1.13
ECHDC1Q9NTX5 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC22.12■■□□□ 1.13
ECHDC1Q9NTX5 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC22.12■■□□□ 1.13
ECHDC1Q9NTX5 CNP-204ENST00000472031 1019 ntTSL 2 BASIC22.12■■□□□ 1.13
ECHDC1Q9NTX5 DUTP2-201ENST00000519164 463 ntBASIC22.12■■□□□ 1.13
ECHDC1Q9NTX5 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC22.12■■□□□ 1.13
ECHDC1Q9NTX5 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC22.12■■□□□ 1.13
ECHDC1Q9NTX5 GXYLT1P4-201ENST00000613576 1192 ntBASIC22.12■■□□□ 1.13
ECHDC1Q9NTX5 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC22.12■■□□□ 1.13
ECHDC1Q9NTX5 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC22.12■■□□□ 1.13
ECHDC1Q9NTX5 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
ECHDC1Q9NTX5 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC22.12■■□□□ 1.13
ECHDC1Q9NTX5 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
ECHDC1Q9NTX5 AP000997.3-201ENST00000623333 2250 ntBASIC22.11■■□□□ 1.13
ECHDC1Q9NTX5 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
ECHDC1Q9NTX5 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC22.11■■□□□ 1.13
ECHDC1Q9NTX5 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
ECHDC1Q9NTX5 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC22.11■■□□□ 1.13
ECHDC1Q9NTX5 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
ECHDC1Q9NTX5 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC22.11■■□□□ 1.13
ECHDC1Q9NTX5 NOC2LP1-202ENST00000452600 2235 ntBASIC22.11■■□□□ 1.13
ECHDC1Q9NTX5 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
ECHDC1Q9NTX5 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC22.11■■□□□ 1.13
ECHDC1Q9NTX5 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
ECHDC1Q9NTX5 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
ECHDC1Q9NTX5 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC22.11■■□□□ 1.13
ECHDC1Q9NTX5 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC22.11■■□□□ 1.13
ECHDC1Q9NTX5 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC22.11■■□□□ 1.13
ECHDC1Q9NTX5 ARMC10P1-201ENST00000313754 855 ntBASIC22.11■■□□□ 1.13
ECHDC1Q9NTX5 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
ECHDC1Q9NTX5 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC22.11■■□□□ 1.13
ECHDC1Q9NTX5 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC22.11■■□□□ 1.13
ECHDC1Q9NTX5 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC22.11■■□□□ 1.13
ECHDC1Q9NTX5 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC22.11■■□□□ 1.13
ECHDC1Q9NTX5 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
ECHDC1Q9NTX5 AC011498.5-201ENST00000592027 486 ntBASIC22.11■■□□□ 1.13
ECHDC1Q9NTX5 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
ECHDC1Q9NTX5 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC22.11■■□□□ 1.13
ECHDC1Q9NTX5 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC22.11■■□□□ 1.13
ECHDC1Q9NTX5 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC22.11■■□□□ 1.13
ECHDC1Q9NTX5 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
ECHDC1Q9NTX5 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC22.11■■□□□ 1.13
ECHDC1Q9NTX5 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms