Protein–RNA interactions for Protein: Q9NPP4

NLRC4, NLR family CARD domain-containing protein 4, humanhuman

Predictions only

Length 1,024 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NLRC4Q9NPP4 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
NLRC4Q9NPP4 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
NLRC4Q9NPP4 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
NLRC4Q9NPP4 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
NLRC4Q9NPP4 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC19.74■□□□□ 0.75
NLRC4Q9NPP4 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
NLRC4Q9NPP4 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
NLRC4Q9NPP4 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
NLRC4Q9NPP4 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
NLRC4Q9NPP4 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
NLRC4Q9NPP4 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC19.73■□□□□ 0.75
NLRC4Q9NPP4 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC19.73■□□□□ 0.75
NLRC4Q9NPP4 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC19.73■□□□□ 0.75
NLRC4Q9NPP4 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
NLRC4Q9NPP4 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
NLRC4Q9NPP4 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
NLRC4Q9NPP4 SLC25A6P5-201ENST00000435663 894 ntBASIC19.73■□□□□ 0.75
NLRC4Q9NPP4 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
NLRC4Q9NPP4 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
NLRC4Q9NPP4 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
NLRC4Q9NPP4 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC19.73■□□□□ 0.75
NLRC4Q9NPP4 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC19.73■□□□□ 0.75
NLRC4Q9NPP4 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC19.73■□□□□ 0.75
NLRC4Q9NPP4 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC19.73■□□□□ 0.75
NLRC4Q9NPP4 AC012317.2-201ENST00000623305 2251 ntBASIC19.73■□□□□ 0.75
NLRC4Q9NPP4 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
NLRC4Q9NPP4 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
NLRC4Q9NPP4 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
NLRC4Q9NPP4 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
NLRC4Q9NPP4 GNE-204ENST00000539208 2190 ntTSL 2 BASIC19.73■□□□□ 0.75
NLRC4Q9NPP4 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC19.73■□□□□ 0.75
NLRC4Q9NPP4 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
NLRC4Q9NPP4 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
NLRC4Q9NPP4 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC19.72■□□□□ 0.75
NLRC4Q9NPP4 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
NLRC4Q9NPP4 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
NLRC4Q9NPP4 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
NLRC4Q9NPP4 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
NLRC4Q9NPP4 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC19.72■□□□□ 0.75
NLRC4Q9NPP4 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
NLRC4Q9NPP4 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC19.72■□□□□ 0.75
NLRC4Q9NPP4 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
NLRC4Q9NPP4 TSPY14P-201ENST00000303979 915 ntBASIC19.72■□□□□ 0.75
NLRC4Q9NPP4 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
NLRC4Q9NPP4 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
NLRC4Q9NPP4 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
NLRC4Q9NPP4 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
NLRC4Q9NPP4 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
NLRC4Q9NPP4 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC19.72■□□□□ 0.75
NLRC4Q9NPP4 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
NLRC4Q9NPP4 PHB2-202ENST00000440277 996 ntTSL 5 BASIC19.72■□□□□ 0.75
NLRC4Q9NPP4 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC19.72■□□□□ 0.75
NLRC4Q9NPP4 AC104390.1-201ENST00000555663 520 ntBASIC19.72■□□□□ 0.75
NLRC4Q9NPP4 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
NLRC4Q9NPP4 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
NLRC4Q9NPP4 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
NLRC4Q9NPP4 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
NLRC4Q9NPP4 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
NLRC4Q9NPP4 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC19.72■□□□□ 0.75
NLRC4Q9NPP4 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
NLRC4Q9NPP4 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
NLRC4Q9NPP4 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
NLRC4Q9NPP4 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC19.72■□□□□ 0.75
NLRC4Q9NPP4 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC19.72■□□□□ 0.75
NLRC4Q9NPP4 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
NLRC4Q9NPP4 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
NLRC4Q9NPP4 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC19.71■□□□□ 0.75
NLRC4Q9NPP4 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
NLRC4Q9NPP4 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC19.71■□□□□ 0.75
NLRC4Q9NPP4 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC19.71■□□□□ 0.75
NLRC4Q9NPP4 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
NLRC4Q9NPP4 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
NLRC4Q9NPP4 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
NLRC4Q9NPP4 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC19.71■□□□□ 0.75
NLRC4Q9NPP4 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
NLRC4Q9NPP4 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC19.71■□□□□ 0.75
NLRC4Q9NPP4 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
NLRC4Q9NPP4 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
NLRC4Q9NPP4 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
NLRC4Q9NPP4 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
NLRC4Q9NPP4 GXYLT1P6-201ENST00000456472 1187 ntBASIC19.71■□□□□ 0.75
NLRC4Q9NPP4 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC19.71■□□□□ 0.75
NLRC4Q9NPP4 MIR4497-201ENST00000583208 89 ntBASIC19.71■□□□□ 0.75
NLRC4Q9NPP4 GLDC-219ENST00000640208 420 ntTSL 2 BASIC19.71■□□□□ 0.75
NLRC4Q9NPP4 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
NLRC4Q9NPP4 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
NLRC4Q9NPP4 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
NLRC4Q9NPP4 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
NLRC4Q9NPP4 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
NLRC4Q9NPP4 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
NLRC4Q9NPP4 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC19.71■□□□□ 0.75
NLRC4Q9NPP4 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
NLRC4Q9NPP4 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
NLRC4Q9NPP4 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC19.71■□□□□ 0.75
NLRC4Q9NPP4 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
NLRC4Q9NPP4 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
NLRC4Q9NPP4 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
NLRC4Q9NPP4 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC19.7■□□□□ 0.74
NLRC4Q9NPP4 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
NLRC4Q9NPP4 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC19.7■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms