Protein–RNA interactions for Protein: Q9NP66

HMG20A, High mobility group protein 20A, humanhuman

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20AQ9NP66 AC104417.2-201ENST00000562989 1793 ntBASIC16.56■□□□□ 0.24
HMG20AQ9NP66 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
HMG20AQ9NP66 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
HMG20AQ9NP66 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
HMG20AQ9NP66 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
HMG20AQ9NP66 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
HMG20AQ9NP66 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
HMG20AQ9NP66 AC092368.3-202ENST00000574180 1591 ntBASIC16.55■□□□□ 0.24
HMG20AQ9NP66 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
HMG20AQ9NP66 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC16.55■□□□□ 0.24
HMG20AQ9NP66 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
HMG20AQ9NP66 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HMG20AQ9NP66 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
HMG20AQ9NP66 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
HMG20AQ9NP66 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HMG20AQ9NP66 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
HMG20AQ9NP66 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HMG20AQ9NP66 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HMG20AQ9NP66 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
HMG20AQ9NP66 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
HMG20AQ9NP66 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
HMG20AQ9NP66 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
HMG20AQ9NP66 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
HMG20AQ9NP66 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
HMG20AQ9NP66 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HMG20AQ9NP66 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
HMG20AQ9NP66 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC16.55■□□□□ 0.24
HMG20AQ9NP66 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC16.55■□□□□ 0.24
HMG20AQ9NP66 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC16.55■□□□□ 0.24
HMG20AQ9NP66 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HMG20AQ9NP66 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC16.55■□□□□ 0.24
HMG20AQ9NP66 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC16.55■□□□□ 0.24
HMG20AQ9NP66 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
HMG20AQ9NP66 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC16.55■□□□□ 0.24
HMG20AQ9NP66 RPS2P52-201ENST00000469610 820 ntBASIC16.55■□□□□ 0.24
HMG20AQ9NP66 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC16.55■□□□□ 0.24
HMG20AQ9NP66 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
HMG20AQ9NP66 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HMG20AQ9NP66 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HMG20AQ9NP66 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC16.55■□□□□ 0.24
HMG20AQ9NP66 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HMG20AQ9NP66 REXO1L9P-201ENST00000604264 2108 ntBASIC16.55■□□□□ 0.24
HMG20AQ9NP66 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC16.55■□□□□ 0.24
HMG20AQ9NP66 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
HMG20AQ9NP66 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
HMG20AQ9NP66 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
HMG20AQ9NP66 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC16.55■□□□□ 0.24
HMG20AQ9NP66 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
HMG20AQ9NP66 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC16.54■□□□□ 0.24
HMG20AQ9NP66 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
HMG20AQ9NP66 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
HMG20AQ9NP66 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC16.54■□□□□ 0.24
HMG20AQ9NP66 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
HMG20AQ9NP66 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
HMG20AQ9NP66 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
HMG20AQ9NP66 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
HMG20AQ9NP66 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC16.54■□□□□ 0.24
HMG20AQ9NP66 REXO2-208ENST00000539754 791 ntTSL 2 BASIC16.54■□□□□ 0.24
HMG20AQ9NP66 MAX-217ENST00000557277 728 ntTSL 3 BASIC16.54■□□□□ 0.24
HMG20AQ9NP66 AL138781.1-201ENST00000566567 1274 ntBASIC16.54■□□□□ 0.24
HMG20AQ9NP66 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC16.54■□□□□ 0.24
HMG20AQ9NP66 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC16.54■□□□□ 0.24
HMG20AQ9NP66 AL109923.1-201ENST00000618799 583 ntBASIC16.54■□□□□ 0.24
HMG20AQ9NP66 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
HMG20AQ9NP66 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC16.54■□□□□ 0.24
HMG20AQ9NP66 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
HMG20AQ9NP66 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC16.54■□□□□ 0.24
HMG20AQ9NP66 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
HMG20AQ9NP66 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
HMG20AQ9NP66 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
HMG20AQ9NP66 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
HMG20AQ9NP66 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
HMG20AQ9NP66 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
HMG20AQ9NP66 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
HMG20AQ9NP66 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
HMG20AQ9NP66 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC16.53■□□□□ 0.24
HMG20AQ9NP66 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
HMG20AQ9NP66 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC16.53■□□□□ 0.24
HMG20AQ9NP66 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
HMG20AQ9NP66 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
HMG20AQ9NP66 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
HMG20AQ9NP66 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
HMG20AQ9NP66 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
HMG20AQ9NP66 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC16.53■□□□□ 0.24
HMG20AQ9NP66 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
HMG20AQ9NP66 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC16.53■□□□□ 0.24
HMG20AQ9NP66 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC16.53■□□□□ 0.24
HMG20AQ9NP66 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC16.53■□□□□ 0.24
HMG20AQ9NP66 TPR-209ENST00000613151 2478 ntTSL 5 BASIC16.53■□□□□ 0.24
HMG20AQ9NP66 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
HMG20AQ9NP66 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
HMG20AQ9NP66 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
HMG20AQ9NP66 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
HMG20AQ9NP66 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
HMG20AQ9NP66 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
HMG20AQ9NP66 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
HMG20AQ9NP66 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC16.53■□□□□ 0.24
HMG20AQ9NP66 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC16.53■□□□□ 0.24
HMG20AQ9NP66 AC060766.5-201ENST00000590539 871 ntBASIC16.53■□□□□ 0.24
HMG20AQ9NP66 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC16.53■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms