Protein–RNA interactions for Protein: Q9NNX9

VCX3A, Variable charge X-linked protein 3, humanhuman

Predictions only

Length 186 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3AQ9NNX9 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
VCX3AQ9NNX9 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
VCX3AQ9NNX9 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
VCX3AQ9NNX9 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
VCX3AQ9NNX9 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
VCX3AQ9NNX9 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
VCX3AQ9NNX9 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC17.02■□□□□ 0.32
VCX3AQ9NNX9 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
VCX3AQ9NNX9 TESC-206ENST00000541210 936 ntTSL 3 BASIC17.02■□□□□ 0.32
VCX3AQ9NNX9 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
VCX3AQ9NNX9 AC100791.3-201ENST00000617619 330 ntBASIC17.02■□□□□ 0.32
VCX3AQ9NNX9 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC17.02■□□□□ 0.32
VCX3AQ9NNX9 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
VCX3AQ9NNX9 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC17.02■□□□□ 0.31
VCX3AQ9NNX9 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
VCX3AQ9NNX9 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.31
VCX3AQ9NNX9 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
VCX3AQ9NNX9 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC17.02■□□□□ 0.31
VCX3AQ9NNX9 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC17.02■□□□□ 0.31
VCX3AQ9NNX9 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
VCX3AQ9NNX9 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
VCX3AQ9NNX9 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
VCX3AQ9NNX9 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
VCX3AQ9NNX9 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC17.02■□□□□ 0.31
VCX3AQ9NNX9 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
VCX3AQ9NNX9 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
VCX3AQ9NNX9 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
VCX3AQ9NNX9 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC17.01■□□□□ 0.31
VCX3AQ9NNX9 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
VCX3AQ9NNX9 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC17.01■□□□□ 0.31
VCX3AQ9NNX9 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
VCX3AQ9NNX9 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
VCX3AQ9NNX9 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
VCX3AQ9NNX9 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC17.01■□□□□ 0.31
VCX3AQ9NNX9 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC17.01■□□□□ 0.31
VCX3AQ9NNX9 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
VCX3AQ9NNX9 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
VCX3AQ9NNX9 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC17.01■□□□□ 0.31
VCX3AQ9NNX9 AL162412.1-201ENST00000567129 965 ntBASIC17.01■□□□□ 0.31
VCX3AQ9NNX9 REXO1L9P-201ENST00000604264 2108 ntBASIC17.01■□□□□ 0.31
VCX3AQ9NNX9 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
VCX3AQ9NNX9 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
VCX3AQ9NNX9 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
VCX3AQ9NNX9 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
VCX3AQ9NNX9 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
VCX3AQ9NNX9 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
VCX3AQ9NNX9 RASA4CP-201ENST00000424092 1398 ntBASIC17.01■□□□□ 0.31
VCX3AQ9NNX9 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
VCX3AQ9NNX9 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
VCX3AQ9NNX9 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
VCX3AQ9NNX9 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
VCX3AQ9NNX9 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
VCX3AQ9NNX9 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
VCX3AQ9NNX9 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC17■□□□□ 0.31
VCX3AQ9NNX9 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
VCX3AQ9NNX9 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
VCX3AQ9NNX9 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC17■□□□□ 0.31
VCX3AQ9NNX9 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC17■□□□□ 0.31
VCX3AQ9NNX9 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC17■□□□□ 0.31
VCX3AQ9NNX9 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC17■□□□□ 0.31
VCX3AQ9NNX9 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
VCX3AQ9NNX9 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
VCX3AQ9NNX9 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
VCX3AQ9NNX9 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
VCX3AQ9NNX9 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
VCX3AQ9NNX9 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC17■□□□□ 0.31
VCX3AQ9NNX9 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC17■□□□□ 0.31
VCX3AQ9NNX9 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
VCX3AQ9NNX9 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC17■□□□□ 0.31
VCX3AQ9NNX9 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
VCX3AQ9NNX9 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC17■□□□□ 0.31
VCX3AQ9NNX9 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC17■□□□□ 0.31
VCX3AQ9NNX9 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC17■□□□□ 0.31
VCX3AQ9NNX9 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC17■□□□□ 0.31
VCX3AQ9NNX9 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
VCX3AQ9NNX9 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC17■□□□□ 0.31
VCX3AQ9NNX9 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC17■□□□□ 0.31
VCX3AQ9NNX9 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
VCX3AQ9NNX9 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC17■□□□□ 0.31
VCX3AQ9NNX9 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC17■□□□□ 0.31
VCX3AQ9NNX9 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
VCX3AQ9NNX9 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC17■□□□□ 0.31
VCX3AQ9NNX9 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
VCX3AQ9NNX9 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
VCX3AQ9NNX9 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
VCX3AQ9NNX9 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC17■□□□□ 0.31
VCX3AQ9NNX9 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC17■□□□□ 0.31
VCX3AQ9NNX9 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
VCX3AQ9NNX9 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
VCX3AQ9NNX9 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC17■□□□□ 0.31
VCX3AQ9NNX9 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC17■□□□□ 0.31
VCX3AQ9NNX9 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC17■□□□□ 0.31
VCX3AQ9NNX9 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
VCX3AQ9NNX9 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
VCX3AQ9NNX9 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
VCX3AQ9NNX9 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
VCX3AQ9NNX9 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
VCX3AQ9NNX9 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
VCX3AQ9NNX9 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
VCX3AQ9NNX9 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC16.99■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms