Protein–RNA interactions for Protein: Q9HCP0

CSNK1G1, Casein kinase I isoform gamma-1, humanhuman

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G1Q9HCP0 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC18.96■□□□□ 0.63
CSNK1G1Q9HCP0 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
CSNK1G1Q9HCP0 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC18.96■□□□□ 0.63
CSNK1G1Q9HCP0 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
CSNK1G1Q9HCP0 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC18.96■□□□□ 0.63
CSNK1G1Q9HCP0 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
CSNK1G1Q9HCP0 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC18.96■□□□□ 0.63
CSNK1G1Q9HCP0 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC18.96■□□□□ 0.63
CSNK1G1Q9HCP0 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
CSNK1G1Q9HCP0 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CSNK1G1Q9HCP0 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CSNK1G1Q9HCP0 BICD1-207ENST00000551848 1962 ntBASIC18.95■□□□□ 0.62
CSNK1G1Q9HCP0 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CSNK1G1Q9HCP0 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
CSNK1G1Q9HCP0 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CSNK1G1Q9HCP0 NSUN5P1-202ENST00000421140 1535 ntBASIC18.95■□□□□ 0.62
CSNK1G1Q9HCP0 NSUN5P2-203ENST00000457352 1529 ntBASIC18.95■□□□□ 0.62
CSNK1G1Q9HCP0 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
CSNK1G1Q9HCP0 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CSNK1G1Q9HCP0 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CSNK1G1Q9HCP0 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC18.95■□□□□ 0.62
CSNK1G1Q9HCP0 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CSNK1G1Q9HCP0 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CSNK1G1Q9HCP0 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CSNK1G1Q9HCP0 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC18.95■□□□□ 0.62
CSNK1G1Q9HCP0 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
CSNK1G1Q9HCP0 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC18.95■□□□□ 0.62
CSNK1G1Q9HCP0 PNN-202ENST00000553331 656 ntTSL 3 BASIC18.95■□□□□ 0.62
CSNK1G1Q9HCP0 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC18.95■□□□□ 0.62
CSNK1G1Q9HCP0 AC012313.10-201ENST00000623509 926 ntBASIC18.95■□□□□ 0.62
CSNK1G1Q9HCP0 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
CSNK1G1Q9HCP0 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
CSNK1G1Q9HCP0 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
CSNK1G1Q9HCP0 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
CSNK1G1Q9HCP0 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
CSNK1G1Q9HCP0 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
CSNK1G1Q9HCP0 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC18.94■□□□□ 0.62
CSNK1G1Q9HCP0 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CSNK1G1Q9HCP0 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CSNK1G1Q9HCP0 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CSNK1G1Q9HCP0 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CSNK1G1Q9HCP0 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CSNK1G1Q9HCP0 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CSNK1G1Q9HCP0 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC18.94■□□□□ 0.62
CSNK1G1Q9HCP0 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CSNK1G1Q9HCP0 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CSNK1G1Q9HCP0 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CSNK1G1Q9HCP0 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CSNK1G1Q9HCP0 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC18.94■□□□□ 0.62
CSNK1G1Q9HCP0 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC18.94■□□□□ 0.62
CSNK1G1Q9HCP0 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CSNK1G1Q9HCP0 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC18.94■□□□□ 0.62
CSNK1G1Q9HCP0 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC18.94■□□□□ 0.62
CSNK1G1Q9HCP0 PRELID1P1-202ENST00000567272 903 ntBASIC18.94■□□□□ 0.62
CSNK1G1Q9HCP0 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC18.94■□□□□ 0.62
CSNK1G1Q9HCP0 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
CSNK1G1Q9HCP0 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CSNK1G1Q9HCP0 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
CSNK1G1Q9HCP0 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC18.94■□□□□ 0.62
CSNK1G1Q9HCP0 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
CSNK1G1Q9HCP0 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
CSNK1G1Q9HCP0 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
CSNK1G1Q9HCP0 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
CSNK1G1Q9HCP0 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CSNK1G1Q9HCP0 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CSNK1G1Q9HCP0 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CSNK1G1Q9HCP0 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
CSNK1G1Q9HCP0 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CSNK1G1Q9HCP0 AL020996.1-203ENST00000536896 2307 ntBASIC18.94■□□□□ 0.62
CSNK1G1Q9HCP0 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
CSNK1G1Q9HCP0 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CSNK1G1Q9HCP0 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CSNK1G1Q9HCP0 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
CSNK1G1Q9HCP0 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
CSNK1G1Q9HCP0 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CSNK1G1Q9HCP0 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC18.93■□□□□ 0.62
CSNK1G1Q9HCP0 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
CSNK1G1Q9HCP0 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CSNK1G1Q9HCP0 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CSNK1G1Q9HCP0 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
CSNK1G1Q9HCP0 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
CSNK1G1Q9HCP0 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC18.93■□□□□ 0.62
CSNK1G1Q9HCP0 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CSNK1G1Q9HCP0 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC18.93■□□□□ 0.62
CSNK1G1Q9HCP0 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
CSNK1G1Q9HCP0 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CSNK1G1Q9HCP0 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC18.93■□□□□ 0.62
CSNK1G1Q9HCP0 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
CSNK1G1Q9HCP0 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CSNK1G1Q9HCP0 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CSNK1G1Q9HCP0 TSPY19P-201ENST00000418461 509 ntBASIC18.93■□□□□ 0.62
CSNK1G1Q9HCP0 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC18.93■□□□□ 0.62
CSNK1G1Q9HCP0 TSPY18P-201ENST00000441642 509 ntBASIC18.93■□□□□ 0.62
CSNK1G1Q9HCP0 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC18.93■□□□□ 0.62
CSNK1G1Q9HCP0 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC18.93■□□□□ 0.62
CSNK1G1Q9HCP0 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC18.93■□□□□ 0.62
CSNK1G1Q9HCP0 KRT126P-201ENST00000549467 1181 ntBASIC18.93■□□□□ 0.62
CSNK1G1Q9HCP0 TBCB-205ENST00000585746 875 ntTSL 3 BASIC18.93■□□□□ 0.62
CSNK1G1Q9HCP0 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC18.93■□□□□ 0.62
CSNK1G1Q9HCP0 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC18.93■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms