Protein–RNA interactions for Protein: Q9HBX3

SND1-IT1, Uncharacterized protein encoded by SND1-IT1, humanhuman

Predictions only

Length 110 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1Q9HBX3 AC008687.6-201ENST00000596318 630 ntBASIC12.21□□□□□ -0.45
SND1-IT1Q9HBX3 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC12.21□□□□□ -0.45
SND1-IT1Q9HBX3 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC12.21□□□□□ -0.45
SND1-IT1Q9HBX3 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC12.21□□□□□ -0.45
SND1-IT1Q9HBX3 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC12.21□□□□□ -0.45
SND1-IT1Q9HBX3 AC068587.9-201ENST00000641814 219 ntBASIC12.21□□□□□ -0.45
SND1-IT1Q9HBX3 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
SND1-IT1Q9HBX3 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
SND1-IT1Q9HBX3 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
SND1-IT1Q9HBX3 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.46
SND1-IT1Q9HBX3 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC12.21□□□□□ -0.46
SND1-IT1Q9HBX3 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC12.21□□□□□ -0.46
SND1-IT1Q9HBX3 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
SND1-IT1Q9HBX3 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
SND1-IT1Q9HBX3 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
SND1-IT1Q9HBX3 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC12.21□□□□□ -0.46
SND1-IT1Q9HBX3 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
SND1-IT1Q9HBX3 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.46
SND1-IT1Q9HBX3 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
SND1-IT1Q9HBX3 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.46
SND1-IT1Q9HBX3 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
SND1-IT1Q9HBX3 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC12.21□□□□□ -0.46
SND1-IT1Q9HBX3 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
SND1-IT1Q9HBX3 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
SND1-IT1Q9HBX3 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC12.2□□□□□ -0.46
SND1-IT1Q9HBX3 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
SND1-IT1Q9HBX3 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
SND1-IT1Q9HBX3 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC12.2□□□□□ -0.46
SND1-IT1Q9HBX3 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC12.2□□□□□ -0.46
SND1-IT1Q9HBX3 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC12.2□□□□□ -0.46
SND1-IT1Q9HBX3 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC12.2□□□□□ -0.46
SND1-IT1Q9HBX3 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
SND1-IT1Q9HBX3 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
SND1-IT1Q9HBX3 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC12.2□□□□□ -0.46
SND1-IT1Q9HBX3 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
SND1-IT1Q9HBX3 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
SND1-IT1Q9HBX3 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
SND1-IT1Q9HBX3 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
SND1-IT1Q9HBX3 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC12.2□□□□□ -0.46
SND1-IT1Q9HBX3 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
SND1-IT1Q9HBX3 CROCCP5-201ENST00000436658 830 ntBASIC12.2□□□□□ -0.46
SND1-IT1Q9HBX3 AC006970.2-201ENST00000450065 779 ntBASIC12.2□□□□□ -0.46
SND1-IT1Q9HBX3 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC12.2□□□□□ -0.46
SND1-IT1Q9HBX3 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC12.2□□□□□ -0.46
SND1-IT1Q9HBX3 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC12.2□□□□□ -0.46
SND1-IT1Q9HBX3 PRKY-204ENST00000533551 1019 ntBASIC12.2□□□□□ -0.46
SND1-IT1Q9HBX3 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
SND1-IT1Q9HBX3 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC12.2□□□□□ -0.46
SND1-IT1Q9HBX3 C1QL1P1-201ENST00000568105 661 ntBASIC12.2□□□□□ -0.46
SND1-IT1Q9HBX3 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
SND1-IT1Q9HBX3 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC12.2□□□□□ -0.46
SND1-IT1Q9HBX3 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC12.2□□□□□ -0.46
SND1-IT1Q9HBX3 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
SND1-IT1Q9HBX3 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC12.2□□□□□ -0.46
SND1-IT1Q9HBX3 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
SND1-IT1Q9HBX3 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
SND1-IT1Q9HBX3 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
SND1-IT1Q9HBX3 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
SND1-IT1Q9HBX3 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC12.2□□□□□ -0.46
SND1-IT1Q9HBX3 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC12.2□□□□□ -0.46
SND1-IT1Q9HBX3 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
SND1-IT1Q9HBX3 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
SND1-IT1Q9HBX3 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
SND1-IT1Q9HBX3 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
SND1-IT1Q9HBX3 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC12.2□□□□□ -0.46
SND1-IT1Q9HBX3 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
SND1-IT1Q9HBX3 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
SND1-IT1Q9HBX3 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
SND1-IT1Q9HBX3 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC12.2□□□□□ -0.46
SND1-IT1Q9HBX3 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
SND1-IT1Q9HBX3 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
SND1-IT1Q9HBX3 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC12.2□□□□□ -0.46
SND1-IT1Q9HBX3 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC12.2□□□□□ -0.46
SND1-IT1Q9HBX3 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
SND1-IT1Q9HBX3 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
SND1-IT1Q9HBX3 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC12.2□□□□□ -0.46
SND1-IT1Q9HBX3 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
SND1-IT1Q9HBX3 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
SND1-IT1Q9HBX3 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC12.19□□□□□ -0.46
SND1-IT1Q9HBX3 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
SND1-IT1Q9HBX3 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC12.19□□□□□ -0.46
SND1-IT1Q9HBX3 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC12.19□□□□□ -0.46
SND1-IT1Q9HBX3 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC12.19□□□□□ -0.46
SND1-IT1Q9HBX3 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
SND1-IT1Q9HBX3 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
SND1-IT1Q9HBX3 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
SND1-IT1Q9HBX3 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC12.19□□□□□ -0.46
SND1-IT1Q9HBX3 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
SND1-IT1Q9HBX3 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC12.19□□□□□ -0.46
SND1-IT1Q9HBX3 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC12.19□□□□□ -0.46
SND1-IT1Q9HBX3 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC12.19□□□□□ -0.46
SND1-IT1Q9HBX3 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC12.19□□□□□ -0.46
SND1-IT1Q9HBX3 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
SND1-IT1Q9HBX3 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
SND1-IT1Q9HBX3 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
SND1-IT1Q9HBX3 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC12.19□□□□□ -0.46
SND1-IT1Q9HBX3 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
SND1-IT1Q9HBX3 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
SND1-IT1Q9HBX3 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
SND1-IT1Q9HBX3 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms