Protein–RNA interactions for Protein: Q9HBL6

LRTM1, Leucine-rich repeat and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1Q9HBL6 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
LRTM1Q9HBL6 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.39
LRTM1Q9HBL6 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC17.51■□□□□ 0.39
LRTM1Q9HBL6 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
LRTM1Q9HBL6 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC17.51■□□□□ 0.39
LRTM1Q9HBL6 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC17.51■□□□□ 0.39
LRTM1Q9HBL6 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
LRTM1Q9HBL6 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC17.51■□□□□ 0.39
LRTM1Q9HBL6 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
LRTM1Q9HBL6 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC17.51■□□□□ 0.39
LRTM1Q9HBL6 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
LRTM1Q9HBL6 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
LRTM1Q9HBL6 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
LRTM1Q9HBL6 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
LRTM1Q9HBL6 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
LRTM1Q9HBL6 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
LRTM1Q9HBL6 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
LRTM1Q9HBL6 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC17.51■□□□□ 0.39
LRTM1Q9HBL6 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC17.51■□□□□ 0.39
LRTM1Q9HBL6 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
LRTM1Q9HBL6 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC17.51■□□□□ 0.39
LRTM1Q9HBL6 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
LRTM1Q9HBL6 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC17.51■□□□□ 0.39
LRTM1Q9HBL6 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
LRTM1Q9HBL6 MIR3180-4-201ENST00000582223 153 ntBASIC17.51■□□□□ 0.39
LRTM1Q9HBL6 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
LRTM1Q9HBL6 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC17.51■□□□□ 0.39
LRTM1Q9HBL6 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
LRTM1Q9HBL6 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
LRTM1Q9HBL6 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC17.51■□□□□ 0.39
LRTM1Q9HBL6 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
LRTM1Q9HBL6 ASL-204ENST00000395331 1538 ntTSL 5 BASIC17.51■□□□□ 0.39
LRTM1Q9HBL6 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC17.51■□□□□ 0.39
LRTM1Q9HBL6 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
LRTM1Q9HBL6 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
LRTM1Q9HBL6 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC17.51■□□□□ 0.39
LRTM1Q9HBL6 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
LRTM1Q9HBL6 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
LRTM1Q9HBL6 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
LRTM1Q9HBL6 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
LRTM1Q9HBL6 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
LRTM1Q9HBL6 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC17.5■□□□□ 0.39
LRTM1Q9HBL6 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
LRTM1Q9HBL6 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC17.5■□□□□ 0.39
LRTM1Q9HBL6 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
LRTM1Q9HBL6 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
LRTM1Q9HBL6 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC17.5■□□□□ 0.39
LRTM1Q9HBL6 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
LRTM1Q9HBL6 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
LRTM1Q9HBL6 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
LRTM1Q9HBL6 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC17.5■□□□□ 0.39
LRTM1Q9HBL6 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC17.5■□□□□ 0.39
LRTM1Q9HBL6 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC17.5■□□□□ 0.39
LRTM1Q9HBL6 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
LRTM1Q9HBL6 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC17.5■□□□□ 0.39
LRTM1Q9HBL6 AC010653.2-201ENST00000623505 997 ntBASIC17.5■□□□□ 0.39
LRTM1Q9HBL6 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
LRTM1Q9HBL6 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC17.5■□□□□ 0.39
LRTM1Q9HBL6 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
LRTM1Q9HBL6 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC17.5■□□□□ 0.39
LRTM1Q9HBL6 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
LRTM1Q9HBL6 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
LRTM1Q9HBL6 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
LRTM1Q9HBL6 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
LRTM1Q9HBL6 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
LRTM1Q9HBL6 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
LRTM1Q9HBL6 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC17.5■□□□□ 0.39
LRTM1Q9HBL6 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
LRTM1Q9HBL6 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
LRTM1Q9HBL6 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
LRTM1Q9HBL6 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
LRTM1Q9HBL6 KRT17P2-201ENST00000300992 1314 ntBASIC17.49■□□□□ 0.39
LRTM1Q9HBL6 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
LRTM1Q9HBL6 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC17.49■□□□□ 0.39
LRTM1Q9HBL6 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
LRTM1Q9HBL6 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
LRTM1Q9HBL6 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
LRTM1Q9HBL6 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
LRTM1Q9HBL6 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
LRTM1Q9HBL6 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
LRTM1Q9HBL6 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
LRTM1Q9HBL6 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
LRTM1Q9HBL6 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
LRTM1Q9HBL6 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC17.49■□□□□ 0.39
LRTM1Q9HBL6 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC17.49■□□□□ 0.39
LRTM1Q9HBL6 GXYLT1P6-201ENST00000456472 1187 ntBASIC17.49■□□□□ 0.39
LRTM1Q9HBL6 SNORA78-201ENST00000459373 127 ntBASIC17.49■□□□□ 0.39
LRTM1Q9HBL6 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
LRTM1Q9HBL6 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC17.49■□□□□ 0.39
LRTM1Q9HBL6 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
LRTM1Q9HBL6 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC17.49■□□□□ 0.39
LRTM1Q9HBL6 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
LRTM1Q9HBL6 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
LRTM1Q9HBL6 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
LRTM1Q9HBL6 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC17.49■□□□□ 0.39
LRTM1Q9HBL6 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
LRTM1Q9HBL6 LTB4R2-202ENST00000528054 3092 ntBASIC17.49■□□□□ 0.39
LRTM1Q9HBL6 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
LRTM1Q9HBL6 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
LRTM1Q9HBL6 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 83.4 ms