Protein–RNA interactions for Protein: Q9H270

VPS11, Vacuolar protein sorting-associated protein 11 homolog, humanhuman

Predictions only

Length 941 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11Q9H270 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
VPS11Q9H270 SLC25A1P4-201ENST00000567977 778 ntBASIC18.32■□□□□ 0.52
VPS11Q9H270 MNT-208ENST00000575394 606 ntTSL 4 BASIC18.32■□□□□ 0.52
VPS11Q9H270 AL359736.2-201ENST00000621992 437 ntBASIC18.32■□□□□ 0.52
VPS11Q9H270 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC18.32■□□□□ 0.52
VPS11Q9H270 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
VPS11Q9H270 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
VPS11Q9H270 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
VPS11Q9H270 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
VPS11Q9H270 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
VPS11Q9H270 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
VPS11Q9H270 NARF-204ENST00000390006 1766 ntTSL 2 BASIC18.32■□□□□ 0.52
VPS11Q9H270 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC18.32■□□□□ 0.52
VPS11Q9H270 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
VPS11Q9H270 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
VPS11Q9H270 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
VPS11Q9H270 AC034236.2-201ENST00000606662 1610 ntBASIC18.31■□□□□ 0.52
VPS11Q9H270 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC18.31■□□□□ 0.52
VPS11Q9H270 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
VPS11Q9H270 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
VPS11Q9H270 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
VPS11Q9H270 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC18.31■□□□□ 0.52
VPS11Q9H270 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
VPS11Q9H270 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
VPS11Q9H270 ELP6-205ENST00000439305 880 ntTSL 2 BASIC18.31■□□□□ 0.52
VPS11Q9H270 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC18.31■□□□□ 0.52
VPS11Q9H270 IRX5-204ENST00000560154 879 ntTSL 5 BASIC18.31■□□□□ 0.52
VPS11Q9H270 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC18.31■□□□□ 0.52
VPS11Q9H270 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC18.31■□□□□ 0.52
VPS11Q9H270 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
VPS11Q9H270 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC18.31■□□□□ 0.52
VPS11Q9H270 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
VPS11Q9H270 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
VPS11Q9H270 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
VPS11Q9H270 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
VPS11Q9H270 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC18.31■□□□□ 0.52
VPS11Q9H270 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC18.31■□□□□ 0.52
VPS11Q9H270 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
VPS11Q9H270 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
VPS11Q9H270 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC18.31■□□□□ 0.52
VPS11Q9H270 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
VPS11Q9H270 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
VPS11Q9H270 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC18.3■□□□□ 0.52
VPS11Q9H270 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
VPS11Q9H270 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC18.3■□□□□ 0.52
VPS11Q9H270 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
VPS11Q9H270 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
VPS11Q9H270 AC006116.8-202ENST00000587620 1550 ntBASIC18.3■□□□□ 0.52
VPS11Q9H270 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC18.3■□□□□ 0.52
VPS11Q9H270 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
VPS11Q9H270 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC18.3■□□□□ 0.52
VPS11Q9H270 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
VPS11Q9H270 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
VPS11Q9H270 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC18.3■□□□□ 0.52
VPS11Q9H270 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC18.3■□□□□ 0.52
VPS11Q9H270 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
VPS11Q9H270 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
VPS11Q9H270 MFAP1P1-201ENST00000442257 1255 ntBASIC18.3■□□□□ 0.52
VPS11Q9H270 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC18.3■□□□□ 0.52
VPS11Q9H270 CD177P1-201ENST00000606252 935 ntBASIC18.3■□□□□ 0.52
VPS11Q9H270 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
VPS11Q9H270 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
VPS11Q9H270 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
VPS11Q9H270 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
VPS11Q9H270 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC18.3■□□□□ 0.52
VPS11Q9H270 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC18.3■□□□□ 0.52
VPS11Q9H270 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
VPS11Q9H270 KRT8P50-201ENST00000562022 1438 ntBASIC18.3■□□□□ 0.52
VPS11Q9H270 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC18.3■□□□□ 0.52
VPS11Q9H270 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
VPS11Q9H270 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
VPS11Q9H270 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
VPS11Q9H270 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
VPS11Q9H270 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
VPS11Q9H270 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
VPS11Q9H270 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
VPS11Q9H270 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
VPS11Q9H270 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
VPS11Q9H270 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC18.29■□□□□ 0.52
VPS11Q9H270 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
VPS11Q9H270 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC18.29■□□□□ 0.52
VPS11Q9H270 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC18.29■□□□□ 0.52
VPS11Q9H270 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
VPS11Q9H270 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC18.29■□□□□ 0.52
VPS11Q9H270 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC18.29■□□□□ 0.52
VPS11Q9H270 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
VPS11Q9H270 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
VPS11Q9H270 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
VPS11Q9H270 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC18.29■□□□□ 0.52
VPS11Q9H270 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC18.29■□□□□ 0.52
VPS11Q9H270 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC18.29■□□□□ 0.52
VPS11Q9H270 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
VPS11Q9H270 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC18.29■□□□□ 0.52
VPS11Q9H270 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
VPS11Q9H270 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC18.29■□□□□ 0.52
VPS11Q9H270 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
VPS11Q9H270 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
VPS11Q9H270 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC18.29■□□□□ 0.52
VPS11Q9H270 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC18.29■□□□□ 0.52
VPS11Q9H270 AC080080.1-201ENST00000625121 2420 ntBASIC18.29■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms