Protein–RNA interactions for Protein: Q9H1C7

CYSTM1, Cysteine-rich and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 97 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYSTM1Q9H1C7 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC10.53□□□□□ -0.72
CYSTM1Q9H1C7 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC10.53□□□□□ -0.72
CYSTM1Q9H1C7 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
CYSTM1Q9H1C7 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
CYSTM1Q9H1C7 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
CYSTM1Q9H1C7 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC10.53□□□□□ -0.72
CYSTM1Q9H1C7 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
CYSTM1Q9H1C7 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC10.53□□□□□ -0.72
CYSTM1Q9H1C7 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
CYSTM1Q9H1C7 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
CYSTM1Q9H1C7 SLC9A3P3-201ENST00000457608 2229 ntBASIC10.53□□□□□ -0.72
CYSTM1Q9H1C7 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC10.53□□□□□ -0.72
CYSTM1Q9H1C7 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
CYSTM1Q9H1C7 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC10.53□□□□□ -0.72
CYSTM1Q9H1C7 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC10.53□□□□□ -0.72
CYSTM1Q9H1C7 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC10.53□□□□□ -0.72
CYSTM1Q9H1C7 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
CYSTM1Q9H1C7 CGB7-203ENST00000597853 3386 ntAPPRIS P1 TSL 2 BASIC10.52□□□□□ -0.72
CYSTM1Q9H1C7 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC10.52□□□□□ -0.72
CYSTM1Q9H1C7 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC10.52□□□□□ -0.72
CYSTM1Q9H1C7 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.72
CYSTM1Q9H1C7 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
CYSTM1Q9H1C7 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC10.52□□□□□ -0.72
CYSTM1Q9H1C7 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
CYSTM1Q9H1C7 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC10.52□□□□□ -0.72
CYSTM1Q9H1C7 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC10.52□□□□□ -0.72
CYSTM1Q9H1C7 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC10.52□□□□□ -0.73
CYSTM1Q9H1C7 FUBP1-203ENST00000370768 2378 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
CYSTM1Q9H1C7 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC10.52□□□□□ -0.73
CYSTM1Q9H1C7 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
CYSTM1Q9H1C7 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
CYSTM1Q9H1C7 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.73
CYSTM1Q9H1C7 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
CYSTM1Q9H1C7 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC10.52□□□□□ -0.73
CYSTM1Q9H1C7 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
CYSTM1Q9H1C7 MARK4-201ENST00000262891 3573 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
CYSTM1Q9H1C7 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC10.52□□□□□ -0.73
CYSTM1Q9H1C7 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC10.52□□□□□ -0.73
CYSTM1Q9H1C7 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
CYSTM1Q9H1C7 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
CYSTM1Q9H1C7 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC10.52□□□□□ -0.73
CYSTM1Q9H1C7 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC10.52□□□□□ -0.73
CYSTM1Q9H1C7 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC10.52□□□□□ -0.73
CYSTM1Q9H1C7 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC10.52□□□□□ -0.73
CYSTM1Q9H1C7 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC10.52□□□□□ -0.73
CYSTM1Q9H1C7 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
CYSTM1Q9H1C7 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC10.52□□□□□ -0.73
CYSTM1Q9H1C7 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
CYSTM1Q9H1C7 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
CYSTM1Q9H1C7 LINC00987-201ENST00000427111 2472 ntTSL 2 BASIC10.52□□□□□ -0.73
CYSTM1Q9H1C7 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
CYSTM1Q9H1C7 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
CYSTM1Q9H1C7 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC10.52□□□□□ -0.73
CYSTM1Q9H1C7 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
CYSTM1Q9H1C7 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
CYSTM1Q9H1C7 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.73
CYSTM1Q9H1C7 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC10.52□□□□□ -0.73
CYSTM1Q9H1C7 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.73
CYSTM1Q9H1C7 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
CYSTM1Q9H1C7 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
CYSTM1Q9H1C7 NFKB2-204ENST00000428099 3416 ntAPPRIS ALT1 TSL 1 (best) BASIC10.52□□□□□ -0.73
CYSTM1Q9H1C7 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
CYSTM1Q9H1C7 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
CYSTM1Q9H1C7 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC10.52□□□□□ -0.73
CYSTM1Q9H1C7 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
CYSTM1Q9H1C7 AP001271.2-201ENST00000624018 1556 ntBASIC10.52□□□□□ -0.73
CYSTM1Q9H1C7 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
CYSTM1Q9H1C7 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC10.52□□□□□ -0.73
CYSTM1Q9H1C7 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC10.52□□□□□ -0.73
CYSTM1Q9H1C7 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
CYSTM1Q9H1C7 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC10.51□□□□□ -0.73
CYSTM1Q9H1C7 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
CYSTM1Q9H1C7 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC10.51□□□□□ -0.73
CYSTM1Q9H1C7 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC10.51□□□□□ -0.73
CYSTM1Q9H1C7 AC005915.1-201ENST00000624912 2018 ntBASIC10.51□□□□□ -0.73
CYSTM1Q9H1C7 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC10.51□□□□□ -0.73
CYSTM1Q9H1C7 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
CYSTM1Q9H1C7 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
CYSTM1Q9H1C7 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC10.51□□□□□ -0.73
CYSTM1Q9H1C7 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
CYSTM1Q9H1C7 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC10.51□□□□□ -0.73
CYSTM1Q9H1C7 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
CYSTM1Q9H1C7 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
CYSTM1Q9H1C7 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC10.51□□□□□ -0.73
CYSTM1Q9H1C7 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC10.51□□□□□ -0.73
CYSTM1Q9H1C7 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
CYSTM1Q9H1C7 SP8-203ENST00000617581 3496 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
CYSTM1Q9H1C7 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
CYSTM1Q9H1C7 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC10.51□□□□□ -0.73
CYSTM1Q9H1C7 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
CYSTM1Q9H1C7 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
CYSTM1Q9H1C7 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
CYSTM1Q9H1C7 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC10.51□□□□□ -0.73
CYSTM1Q9H1C7 ACE-203ENST00000413513 2237 ntTSL 2 BASIC10.51□□□□□ -0.73
CYSTM1Q9H1C7 ABLIM2-213ENST00000514025 2974 ntTSL 2 BASIC10.51□□□□□ -0.73
CYSTM1Q9H1C7 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC10.51□□□□□ -0.73
CYSTM1Q9H1C7 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
CYSTM1Q9H1C7 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC10.51□□□□□ -0.73
CYSTM1Q9H1C7 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC10.51□□□□□ -0.73
CYSTM1Q9H1C7 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Retrieved 100 of 98,524 protein–RNA pairs in 53.2 ms