Protein–RNA interactions for Protein: Q9H1A7

POLR2J3, DNA-directed RNA polymerase II subunit RPB11-b2, humanhuman

Known RBP Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3Q9H1A7 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
POLR2J3Q9H1A7 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
POLR2J3Q9H1A7 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
POLR2J3Q9H1A7 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
POLR2J3Q9H1A7 PEX7-202ENST00000367756 680 ntTSL 3 BASIC16.83■□□□□ 0.28
POLR2J3Q9H1A7 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
POLR2J3Q9H1A7 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
POLR2J3Q9H1A7 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC16.83■□□□□ 0.28
POLR2J3Q9H1A7 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
POLR2J3Q9H1A7 TSPY20P-201ENST00000450910 630 ntBASIC16.83■□□□□ 0.28
POLR2J3Q9H1A7 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
POLR2J3Q9H1A7 FDX2-206ENST00000492239 773 ntTSL 2 BASIC16.83■□□□□ 0.28
POLR2J3Q9H1A7 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
POLR2J3Q9H1A7 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
POLR2J3Q9H1A7 DENND3-207ENST00000518347 850 ntTSL 2 BASIC16.83■□□□□ 0.28
POLR2J3Q9H1A7 PENK-204ENST00000518770 863 ntTSL 2 BASIC16.83■□□□□ 0.28
POLR2J3Q9H1A7 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
POLR2J3Q9H1A7 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
POLR2J3Q9H1A7 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC16.83■□□□□ 0.28
POLR2J3Q9H1A7 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
POLR2J3Q9H1A7 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC16.83■□□□□ 0.28
POLR2J3Q9H1A7 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC16.83■□□□□ 0.28
POLR2J3Q9H1A7 AC026471.5-201ENST00000615068 467 ntBASIC16.83■□□□□ 0.28
POLR2J3Q9H1A7 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
POLR2J3Q9H1A7 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC16.83■□□□□ 0.28
POLR2J3Q9H1A7 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
POLR2J3Q9H1A7 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
POLR2J3Q9H1A7 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
POLR2J3Q9H1A7 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
POLR2J3Q9H1A7 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC16.82■□□□□ 0.28
POLR2J3Q9H1A7 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
POLR2J3Q9H1A7 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
POLR2J3Q9H1A7 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC16.82■□□□□ 0.28
POLR2J3Q9H1A7 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
POLR2J3Q9H1A7 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
POLR2J3Q9H1A7 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
POLR2J3Q9H1A7 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
POLR2J3Q9H1A7 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
POLR2J3Q9H1A7 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
POLR2J3Q9H1A7 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
POLR2J3Q9H1A7 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC16.82■□□□□ 0.28
POLR2J3Q9H1A7 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC16.82■□□□□ 0.28
POLR2J3Q9H1A7 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC16.82■□□□□ 0.28
POLR2J3Q9H1A7 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
POLR2J3Q9H1A7 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
POLR2J3Q9H1A7 AC098590.1-201ENST00000468126 897 ntBASIC16.82■□□□□ 0.28
POLR2J3Q9H1A7 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC16.82■□□□□ 0.28
POLR2J3Q9H1A7 AL353719.1-201ENST00000566847 864 ntBASIC16.82■□□□□ 0.28
POLR2J3Q9H1A7 MIR4674-201ENST00000582457 87 ntBASIC16.82■□□□□ 0.28
POLR2J3Q9H1A7 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC16.82■□□□□ 0.28
POLR2J3Q9H1A7 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC16.82■□□□□ 0.28
POLR2J3Q9H1A7 AL023803.3-201ENST00000615559 522 ntBASIC16.82■□□□□ 0.28
POLR2J3Q9H1A7 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
POLR2J3Q9H1A7 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
POLR2J3Q9H1A7 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
POLR2J3Q9H1A7 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
POLR2J3Q9H1A7 AL096828.2-201ENST00000567259 1965 ntBASIC16.82■□□□□ 0.28
POLR2J3Q9H1A7 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
POLR2J3Q9H1A7 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC16.82■□□□□ 0.28
POLR2J3Q9H1A7 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC16.82■□□□□ 0.28
POLR2J3Q9H1A7 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC16.82■□□□□ 0.28
POLR2J3Q9H1A7 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
POLR2J3Q9H1A7 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
POLR2J3Q9H1A7 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC16.81■□□□□ 0.28
POLR2J3Q9H1A7 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
POLR2J3Q9H1A7 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
POLR2J3Q9H1A7 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC16.81■□□□□ 0.28
POLR2J3Q9H1A7 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
POLR2J3Q9H1A7 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
POLR2J3Q9H1A7 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
POLR2J3Q9H1A7 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
POLR2J3Q9H1A7 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
POLR2J3Q9H1A7 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
POLR2J3Q9H1A7 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
POLR2J3Q9H1A7 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
POLR2J3Q9H1A7 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC16.81■□□□□ 0.28
POLR2J3Q9H1A7 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
POLR2J3Q9H1A7 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
POLR2J3Q9H1A7 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
POLR2J3Q9H1A7 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
POLR2J3Q9H1A7 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
POLR2J3Q9H1A7 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
POLR2J3Q9H1A7 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
POLR2J3Q9H1A7 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
POLR2J3Q9H1A7 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC16.81■□□□□ 0.28
POLR2J3Q9H1A7 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
POLR2J3Q9H1A7 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC16.81■□□□□ 0.28
POLR2J3Q9H1A7 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
POLR2J3Q9H1A7 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC16.81■□□□□ 0.28
POLR2J3Q9H1A7 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
POLR2J3Q9H1A7 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
POLR2J3Q9H1A7 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
POLR2J3Q9H1A7 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
POLR2J3Q9H1A7 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC16.81■□□□□ 0.28
POLR2J3Q9H1A7 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
POLR2J3Q9H1A7 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
POLR2J3Q9H1A7 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
POLR2J3Q9H1A7 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
POLR2J3Q9H1A7 SDHAP2-201ENST00000455183 2001 ntBASIC16.8■□□□□ 0.28
POLR2J3Q9H1A7 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms