Protein–RNA interactions for Protein: Q9BSE4

HERPUD2, Homocysteine-responsive endoplasmic reticulum-resident ubiquitin-like domain member 2 protein, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2Q9BSE4 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
HERPUD2Q9BSE4 LINC01568-207ENST00000641790 1380 ntBASIC18.84■□□□□ 0.61
HERPUD2Q9BSE4 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
HERPUD2Q9BSE4 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC18.84■□□□□ 0.61
HERPUD2Q9BSE4 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
HERPUD2Q9BSE4 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
HERPUD2Q9BSE4 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC18.84■□□□□ 0.61
HERPUD2Q9BSE4 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
HERPUD2Q9BSE4 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
HERPUD2Q9BSE4 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
HERPUD2Q9BSE4 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC18.84■□□□□ 0.61
HERPUD2Q9BSE4 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
HERPUD2Q9BSE4 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC18.84■□□□□ 0.61
HERPUD2Q9BSE4 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC18.84■□□□□ 0.61
HERPUD2Q9BSE4 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC18.84■□□□□ 0.61
HERPUD2Q9BSE4 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC18.84■□□□□ 0.61
HERPUD2Q9BSE4 FAM210CP-201ENST00000445714 574 ntBASIC18.84■□□□□ 0.61
HERPUD2Q9BSE4 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
HERPUD2Q9BSE4 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC18.84■□□□□ 0.61
HERPUD2Q9BSE4 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC18.84■□□□□ 0.61
HERPUD2Q9BSE4 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC18.84■□□□□ 0.61
HERPUD2Q9BSE4 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC18.84■□□□□ 0.61
HERPUD2Q9BSE4 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
HERPUD2Q9BSE4 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC18.84■□□□□ 0.61
HERPUD2Q9BSE4 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC18.84■□□□□ 0.61
HERPUD2Q9BSE4 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC18.84■□□□□ 0.61
HERPUD2Q9BSE4 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
HERPUD2Q9BSE4 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
HERPUD2Q9BSE4 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
HERPUD2Q9BSE4 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
HERPUD2Q9BSE4 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
HERPUD2Q9BSE4 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
HERPUD2Q9BSE4 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC18.84■□□□□ 0.61
HERPUD2Q9BSE4 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC18.84■□□□□ 0.61
HERPUD2Q9BSE4 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC18.83■□□□□ 0.61
HERPUD2Q9BSE4 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
HERPUD2Q9BSE4 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
HERPUD2Q9BSE4 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.61
HERPUD2Q9BSE4 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
HERPUD2Q9BSE4 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
HERPUD2Q9BSE4 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
HERPUD2Q9BSE4 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
HERPUD2Q9BSE4 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
HERPUD2Q9BSE4 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
HERPUD2Q9BSE4 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
HERPUD2Q9BSE4 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
HERPUD2Q9BSE4 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
HERPUD2Q9BSE4 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC18.83■□□□□ 0.6
HERPUD2Q9BSE4 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
HERPUD2Q9BSE4 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC18.83■□□□□ 0.6
HERPUD2Q9BSE4 MIR3180-4-201ENST00000582223 153 ntBASIC18.83■□□□□ 0.6
HERPUD2Q9BSE4 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC18.83■□□□□ 0.6
HERPUD2Q9BSE4 CEP83-AS1-201ENST00000623122 2482 ntBASIC18.83■□□□□ 0.6
HERPUD2Q9BSE4 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC18.83■□□□□ 0.6
HERPUD2Q9BSE4 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
HERPUD2Q9BSE4 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
HERPUD2Q9BSE4 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC18.83■□□□□ 0.6
HERPUD2Q9BSE4 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
HERPUD2Q9BSE4 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
HERPUD2Q9BSE4 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC18.82■□□□□ 0.6
HERPUD2Q9BSE4 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
HERPUD2Q9BSE4 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
HERPUD2Q9BSE4 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
HERPUD2Q9BSE4 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
HERPUD2Q9BSE4 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
HERPUD2Q9BSE4 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
HERPUD2Q9BSE4 KRT18P22-201ENST00000402024 1347 ntBASIC18.82■□□□□ 0.6
HERPUD2Q9BSE4 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC18.82■□□□□ 0.6
HERPUD2Q9BSE4 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC18.82■□□□□ 0.6
HERPUD2Q9BSE4 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC18.82■□□□□ 0.6
HERPUD2Q9BSE4 Telomerase-vert.1-201ENST00000363312 438 ntBASIC18.82■□□□□ 0.6
HERPUD2Q9BSE4 CRAT-202ENST00000393384 973 ntTSL 2 BASIC18.82■□□□□ 0.6
HERPUD2Q9BSE4 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
HERPUD2Q9BSE4 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC18.82■□□□□ 0.6
HERPUD2Q9BSE4 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC18.82■□□□□ 0.6
HERPUD2Q9BSE4 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC18.82■□□□□ 0.6
HERPUD2Q9BSE4 PPOX-219ENST00000544598 813 ntTSL 2 BASIC18.82■□□□□ 0.6
HERPUD2Q9BSE4 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC18.82■□□□□ 0.6
HERPUD2Q9BSE4 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
HERPUD2Q9BSE4 NARF-204ENST00000390006 1766 ntTSL 2 BASIC18.82■□□□□ 0.6
HERPUD2Q9BSE4 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
HERPUD2Q9BSE4 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC18.82■□□□□ 0.6
HERPUD2Q9BSE4 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC18.82■□□□□ 0.6
HERPUD2Q9BSE4 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
HERPUD2Q9BSE4 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
HERPUD2Q9BSE4 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
HERPUD2Q9BSE4 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC18.82■□□□□ 0.6
HERPUD2Q9BSE4 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
HERPUD2Q9BSE4 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
HERPUD2Q9BSE4 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
HERPUD2Q9BSE4 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
HERPUD2Q9BSE4 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HERPUD2Q9BSE4 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
HERPUD2Q9BSE4 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
HERPUD2Q9BSE4 ASL-204ENST00000395331 1538 ntTSL 5 BASIC18.81■□□□□ 0.6
HERPUD2Q9BSE4 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC18.81■□□□□ 0.6
HERPUD2Q9BSE4 AC108860.2-201ENST00000562760 2183 ntBASIC18.81■□□□□ 0.6
HERPUD2Q9BSE4 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
HERPUD2Q9BSE4 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HERPUD2Q9BSE4 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 49.1 ms