Protein–RNA interactions for Protein: Q99466

NOTCH4, Neurogenic locus notch homolog protein 4, humanhuman

Predictions only

Length 2,003 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH4Q99466 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC18.66■□□□□ 0.58
NOTCH4Q99466 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC18.66■□□□□ 0.58
NOTCH4Q99466 RNF151-202ENST00000569210 853 ntTSL 2 BASIC18.66■□□□□ 0.58
NOTCH4Q99466 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC18.66■□□□□ 0.58
NOTCH4Q99466 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
NOTCH4Q99466 AC104109.2-201ENST00000602919 1418 ntBASIC18.65■□□□□ 0.58
NOTCH4Q99466 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
NOTCH4Q99466 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
NOTCH4Q99466 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC18.65■□□□□ 0.58
NOTCH4Q99466 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
NOTCH4Q99466 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
NOTCH4Q99466 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
NOTCH4Q99466 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC18.65■□□□□ 0.58
NOTCH4Q99466 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
NOTCH4Q99466 YBX2P1-201ENST00000394192 760 ntBASIC18.65■□□□□ 0.58
NOTCH4Q99466 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
NOTCH4Q99466 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC18.65■□□□□ 0.58
NOTCH4Q99466 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC18.65■□□□□ 0.58
NOTCH4Q99466 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
NOTCH4Q99466 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
NOTCH4Q99466 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
NOTCH4Q99466 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
NOTCH4Q99466 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
NOTCH4Q99466 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
NOTCH4Q99466 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
NOTCH4Q99466 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC18.64■□□□□ 0.58
NOTCH4Q99466 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC18.64■□□□□ 0.58
NOTCH4Q99466 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC18.64■□□□□ 0.58
NOTCH4Q99466 AC007967.2-201ENST00000432613 625 ntBASIC18.64■□□□□ 0.58
NOTCH4Q99466 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC18.64■□□□□ 0.58
NOTCH4Q99466 AL356488.2-201ENST00000602755 427 ntBASIC18.64■□□□□ 0.58
NOTCH4Q99466 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.58
NOTCH4Q99466 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC18.64■□□□□ 0.58
NOTCH4Q99466 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
NOTCH4Q99466 FAM197Y3-203ENST00000618346 717 ntBASIC18.64■□□□□ 0.58
NOTCH4Q99466 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC18.64■□□□□ 0.57
NOTCH4Q99466 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
NOTCH4Q99466 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
NOTCH4Q99466 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC18.64■□□□□ 0.57
NOTCH4Q99466 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC18.64■□□□□ 0.57
NOTCH4Q99466 GMCL1P1-201ENST00000463439 1581 ntBASIC18.64■□□□□ 0.57
NOTCH4Q99466 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
NOTCH4Q99466 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
NOTCH4Q99466 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
NOTCH4Q99466 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
NOTCH4Q99466 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
NOTCH4Q99466 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
NOTCH4Q99466 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC18.64■□□□□ 0.57
NOTCH4Q99466 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC18.64■□□□□ 0.57
NOTCH4Q99466 KRT18P27-201ENST00000427733 1299 ntBASIC18.64■□□□□ 0.57
NOTCH4Q99466 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC18.64■□□□□ 0.57
NOTCH4Q99466 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC18.64■□□□□ 0.57
NOTCH4Q99466 RPS29-206ENST00000557111 488 ntTSL 2 BASIC18.64■□□□□ 0.57
NOTCH4Q99466 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC18.64■□□□□ 0.57
NOTCH4Q99466 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC18.64■□□□□ 0.57
NOTCH4Q99466 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC18.64■□□□□ 0.57
NOTCH4Q99466 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC18.64■□□□□ 0.57
NOTCH4Q99466 AC107918.4-202ENST00000641623 219 ntBASIC18.64■□□□□ 0.57
NOTCH4Q99466 ZNF259P1-201ENST00000407656 1365 ntBASIC18.64■□□□□ 0.57
NOTCH4Q99466 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
NOTCH4Q99466 AC126763.1-201ENST00000552015 2118 ntBASIC18.64■□□□□ 0.57
NOTCH4Q99466 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC18.64■□□□□ 0.57
NOTCH4Q99466 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC18.63■□□□□ 0.57
NOTCH4Q99466 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC18.63■□□□□ 0.57
NOTCH4Q99466 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
NOTCH4Q99466 INIP-202ENST00000374236 874 ntTSL 2 BASIC18.63■□□□□ 0.57
NOTCH4Q99466 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
NOTCH4Q99466 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC18.63■□□□□ 0.57
NOTCH4Q99466 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC18.63■□□□□ 0.57
NOTCH4Q99466 AP002414.3-201ENST00000589352 1468 ntBASIC18.63■□□□□ 0.57
NOTCH4Q99466 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
NOTCH4Q99466 PMPCAP1-201ENST00000508114 1576 ntBASIC18.63■□□□□ 0.57
NOTCH4Q99466 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
NOTCH4Q99466 HLA-J-201ENST00000462773 1622 ntBASIC18.63■□□□□ 0.57
NOTCH4Q99466 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
NOTCH4Q99466 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
NOTCH4Q99466 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
NOTCH4Q99466 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
NOTCH4Q99466 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
NOTCH4Q99466 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC18.62■□□□□ 0.57
NOTCH4Q99466 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
NOTCH4Q99466 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
NOTCH4Q99466 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
NOTCH4Q99466 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
NOTCH4Q99466 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC18.62■□□□□ 0.57
NOTCH4Q99466 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC18.62■□□□□ 0.57
NOTCH4Q99466 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC18.62■□□□□ 0.57
NOTCH4Q99466 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC18.62■□□□□ 0.57
NOTCH4Q99466 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC18.62■□□□□ 0.57
NOTCH4Q99466 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
NOTCH4Q99466 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
NOTCH4Q99466 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC18.62■□□□□ 0.57
NOTCH4Q99466 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
NOTCH4Q99466 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
NOTCH4Q99466 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC18.62■□□□□ 0.57
NOTCH4Q99466 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
NOTCH4Q99466 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
NOTCH4Q99466 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC18.62■□□□□ 0.57
NOTCH4Q99466 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC18.62■□□□□ 0.57
NOTCH4Q99466 SIGLEC16-201ENST00000599858 1437 ntBASIC18.62■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms