Protein–RNA interactions for Protein: Q96TA0

PCDHB18P, Putative protocadherin beta-18, humanhuman

Predictions only

Length 734 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB18PQ96TA0 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
PCDHB18PQ96TA0 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PCDHB18PQ96TA0 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
PCDHB18PQ96TA0 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PCDHB18PQ96TA0 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PCDHB18PQ96TA0 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC19.28■□□□□ 0.68
PCDHB18PQ96TA0 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
PCDHB18PQ96TA0 AC006116.8-202ENST00000587620 1550 ntBASIC19.28■□□□□ 0.68
PCDHB18PQ96TA0 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC19.28■□□□□ 0.68
PCDHB18PQ96TA0 AC073508.3-201ENST00000619697 1419 ntBASIC19.28■□□□□ 0.68
PCDHB18PQ96TA0 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PCDHB18PQ96TA0 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
PCDHB18PQ96TA0 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
PCDHB18PQ96TA0 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
PCDHB18PQ96TA0 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC19.28■□□□□ 0.68
PCDHB18PQ96TA0 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
PCDHB18PQ96TA0 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC19.28■□□□□ 0.68
PCDHB18PQ96TA0 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC19.28■□□□□ 0.68
PCDHB18PQ96TA0 MNT-208ENST00000575394 606 ntTSL 4 BASIC19.28■□□□□ 0.68
PCDHB18PQ96TA0 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC19.28■□□□□ 0.68
PCDHB18PQ96TA0 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC19.28■□□□□ 0.68
PCDHB18PQ96TA0 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC19.28■□□□□ 0.68
PCDHB18PQ96TA0 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PCDHB18PQ96TA0 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PCDHB18PQ96TA0 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
PCDHB18PQ96TA0 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PCDHB18PQ96TA0 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
PCDHB18PQ96TA0 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
PCDHB18PQ96TA0 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC19.28■□□□□ 0.68
PCDHB18PQ96TA0 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC19.28■□□□□ 0.68
PCDHB18PQ96TA0 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
PCDHB18PQ96TA0 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
PCDHB18PQ96TA0 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC19.27■□□□□ 0.68
PCDHB18PQ96TA0 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
PCDHB18PQ96TA0 LINC00167-201ENST00000530583 1419 ntBASIC19.27■□□□□ 0.68
PCDHB18PQ96TA0 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
PCDHB18PQ96TA0 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
PCDHB18PQ96TA0 KRT18P55-202ENST00000578578 1546 ntBASIC19.27■□□□□ 0.68
PCDHB18PQ96TA0 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC19.27■□□□□ 0.68
PCDHB18PQ96TA0 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
PCDHB18PQ96TA0 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
PCDHB18PQ96TA0 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
PCDHB18PQ96TA0 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PCDHB18PQ96TA0 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PCDHB18PQ96TA0 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PCDHB18PQ96TA0 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC19.27■□□□□ 0.68
PCDHB18PQ96TA0 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC19.27■□□□□ 0.68
PCDHB18PQ96TA0 AP000523.1-201ENST00000398242 1049 ntBASIC19.27■□□□□ 0.68
PCDHB18PQ96TA0 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PCDHB18PQ96TA0 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
PCDHB18PQ96TA0 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PCDHB18PQ96TA0 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
PCDHB18PQ96TA0 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC19.27■□□□□ 0.68
PCDHB18PQ96TA0 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
PCDHB18PQ96TA0 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC19.27■□□□□ 0.68
PCDHB18PQ96TA0 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
PCDHB18PQ96TA0 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PCDHB18PQ96TA0 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC19.27■□□□□ 0.68
PCDHB18PQ96TA0 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
PCDHB18PQ96TA0 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.67
PCDHB18PQ96TA0 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.67
PCDHB18PQ96TA0 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.67
PCDHB18PQ96TA0 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
PCDHB18PQ96TA0 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.67
PCDHB18PQ96TA0 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
PCDHB18PQ96TA0 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
PCDHB18PQ96TA0 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
PCDHB18PQ96TA0 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PCDHB18PQ96TA0 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PCDHB18PQ96TA0 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
PCDHB18PQ96TA0 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PCDHB18PQ96TA0 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
PCDHB18PQ96TA0 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PCDHB18PQ96TA0 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PCDHB18PQ96TA0 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC19.26■□□□□ 0.67
PCDHB18PQ96TA0 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PCDHB18PQ96TA0 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
PCDHB18PQ96TA0 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
PCDHB18PQ96TA0 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC19.26■□□□□ 0.67
PCDHB18PQ96TA0 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC19.26■□□□□ 0.67
PCDHB18PQ96TA0 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PCDHB18PQ96TA0 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PCDHB18PQ96TA0 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PCDHB18PQ96TA0 TERF1P1-201ENST00000311003 1181 ntBASIC19.26■□□□□ 0.67
PCDHB18PQ96TA0 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
PCDHB18PQ96TA0 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PCDHB18PQ96TA0 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC19.26■□□□□ 0.67
PCDHB18PQ96TA0 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC19.26■□□□□ 0.67
PCDHB18PQ96TA0 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC19.26■□□□□ 0.67
PCDHB18PQ96TA0 DUTP2-201ENST00000519164 463 ntBASIC19.26■□□□□ 0.67
PCDHB18PQ96TA0 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
PCDHB18PQ96TA0 AC011558.1-201ENST00000623459 338 ntBASIC19.26■□□□□ 0.67
PCDHB18PQ96TA0 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
PCDHB18PQ96TA0 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PCDHB18PQ96TA0 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PCDHB18PQ96TA0 AC100803.2-201ENST00000562459 1963 ntBASIC19.26■□□□□ 0.67
PCDHB18PQ96TA0 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC19.26■□□□□ 0.67
PCDHB18PQ96TA0 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PCDHB18PQ96TA0 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PCDHB18PQ96TA0 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms