Protein–RNA interactions for Protein: Q96T58

SPEN, Msx2-interacting protein, humanhuman

Known RBP Predictions only

Length 3,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPENQ96T58 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
SPENQ96T58 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SPENQ96T58 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
SPENQ96T58 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC16.32■□□□□ 0.2
SPENQ96T58 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
SPENQ96T58 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC16.32■□□□□ 0.2
SPENQ96T58 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC16.32■□□□□ 0.2
SPENQ96T58 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SPENQ96T58 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SPENQ96T58 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SPENQ96T58 AC112777.1-201ENST00000540175 1423 ntBASIC16.32■□□□□ 0.2
SPENQ96T58 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SPENQ96T58 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SPENQ96T58 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC16.32■□□□□ 0.2
SPENQ96T58 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC16.32■□□□□ 0.2
SPENQ96T58 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC16.32■□□□□ 0.2
SPENQ96T58 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SPENQ96T58 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC16.32■□□□□ 0.2
SPENQ96T58 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SPENQ96T58 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SPENQ96T58 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC16.32■□□□□ 0.2
SPENQ96T58 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SPENQ96T58 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
SPENQ96T58 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
SPENQ96T58 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
SPENQ96T58 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SPENQ96T58 AC073621.1-201ENST00000392730 636 ntBASIC16.32■□□□□ 0.2
SPENQ96T58 PMP22-202ENST00000395936 816 ntTSL 3 BASIC16.32■□□□□ 0.2
SPENQ96T58 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
SPENQ96T58 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC16.32■□□□□ 0.2
SPENQ96T58 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC16.32■□□□□ 0.2
SPENQ96T58 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC16.32■□□□□ 0.2
SPENQ96T58 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SPENQ96T58 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC16.31■□□□□ 0.2
SPENQ96T58 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SPENQ96T58 CENPM-204ENST00000402420 688 ntTSL 5 BASIC16.31■□□□□ 0.2
SPENQ96T58 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SPENQ96T58 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SPENQ96T58 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
SPENQ96T58 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SPENQ96T58 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SPENQ96T58 LINC01126-201ENST00000623515 1646 ntBASIC16.31■□□□□ 0.2
SPENQ96T58 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
SPENQ96T58 RPS15-207ENST00000591032 550 ntTSL 3 BASIC16.31■□□□□ 0.2
SPENQ96T58 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC16.31■□□□□ 0.2
SPENQ96T58 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC16.31■□□□□ 0.2
SPENQ96T58 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SPENQ96T58 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
SPENQ96T58 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC16.31■□□□□ 0.2
SPENQ96T58 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SPENQ96T58 DNAJB3-201ENST00000446806 729 ntBASIC16.31■□□□□ 0.2
SPENQ96T58 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC16.31■□□□□ 0.2
SPENQ96T58 AC068472.1-201ENST00000474589 881 ntBASIC16.31■□□□□ 0.2
SPENQ96T58 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC16.31■□□□□ 0.2
SPENQ96T58 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SPENQ96T58 OR7E14P-202ENST00000530490 1290 ntBASIC16.31■□□□□ 0.2
SPENQ96T58 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC16.31■□□□□ 0.2
SPENQ96T58 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
SPENQ96T58 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
SPENQ96T58 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC16.3■□□□□ 0.2
SPENQ96T58 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC16.3■□□□□ 0.2
SPENQ96T58 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SPENQ96T58 KLK8-202ENST00000320838 456 ntTSL 5 BASIC16.3■□□□□ 0.2
SPENQ96T58 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC16.3■□□□□ 0.2
SPENQ96T58 PDPK2P-202ENST00000562415 1191 ntBASIC16.3■□□□□ 0.2
SPENQ96T58 AC040169.1-201ENST00000565382 521 ntBASIC16.3■□□□□ 0.2
SPENQ96T58 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC16.3■□□□□ 0.2
SPENQ96T58 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC16.3■□□□□ 0.2
SPENQ96T58 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SPENQ96T58 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
SPENQ96T58 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC16.3■□□□□ 0.2
SPENQ96T58 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
SPENQ96T58 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SPENQ96T58 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SPENQ96T58 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC16.3■□□□□ 0.2
SPENQ96T58 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC16.3■□□□□ 0.2
SPENQ96T58 AC002347.1-201ENST00000569543 541 ntBASIC16.3■□□□□ 0.2
SPENQ96T58 AL139288.1-201ENST00000623748 933 ntBASIC16.3■□□□□ 0.2
SPENQ96T58 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
SPENQ96T58 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SPENQ96T58 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SPENQ96T58 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SPENQ96T58 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC16.3■□□□□ 0.2
SPENQ96T58 PMPCAP1-201ENST00000508114 1576 ntBASIC16.3■□□□□ 0.2
SPENQ96T58 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
SPENQ96T58 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SPENQ96T58 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC16.3■□□□□ 0.2
SPENQ96T58 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC16.3■□□□□ 0.2
SPENQ96T58 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SPENQ96T58 LHX6-205ENST00000464484 666 ntTSL 2 BASIC16.3■□□□□ 0.2
SPENQ96T58 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC16.3■□□□□ 0.2
SPENQ96T58 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC16.3■□□□□ 0.2
SPENQ96T58 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC16.3■□□□□ 0.2
SPENQ96T58 AC107918.4-202ENST00000641623 219 ntBASIC16.3■□□□□ 0.2
SPENQ96T58 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC16.3■□□□□ 0.2
SPENQ96T58 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC16.3■□□□□ 0.2
SPENQ96T58 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC16.29■□□□□ 0.2
SPENQ96T58 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SPENQ96T58 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SPENQ96T58 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms