Protein–RNA interactions for Protein: Q96KN3

PKNOX2, Homeobox protein PKNOX2, humanhuman

Predictions only

Length 472 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX2Q96KN3 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC19.69■□□□□ 0.74
PKNOX2Q96KN3 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
PKNOX2Q96KN3 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PKNOX2Q96KN3 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC19.69■□□□□ 0.74
PKNOX2Q96KN3 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC19.69■□□□□ 0.74
PKNOX2Q96KN3 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
PKNOX2Q96KN3 AC134043.2-201ENST00000624206 2238 ntBASIC19.69■□□□□ 0.74
PKNOX2Q96KN3 RGMA-204ENST00000543599 3174 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
PKNOX2Q96KN3 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PKNOX2Q96KN3 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
PKNOX2Q96KN3 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
PKNOX2Q96KN3 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
PKNOX2Q96KN3 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PKNOX2Q96KN3 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
PKNOX2Q96KN3 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
PKNOX2Q96KN3 IRX1P1-201ENST00000438849 1838 ntBASIC19.69■□□□□ 0.74
PKNOX2Q96KN3 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
PKNOX2Q96KN3 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
PKNOX2Q96KN3 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
PKNOX2Q96KN3 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC19.68■□□□□ 0.74
PKNOX2Q96KN3 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
PKNOX2Q96KN3 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
PKNOX2Q96KN3 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC19.68■□□□□ 0.74
PKNOX2Q96KN3 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC19.68■□□□□ 0.74
PKNOX2Q96KN3 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC19.68■□□□□ 0.74
PKNOX2Q96KN3 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
PKNOX2Q96KN3 GCK-209ENST00000616242 2260 ntTSL 5 BASIC19.68■□□□□ 0.74
PKNOX2Q96KN3 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
PKNOX2Q96KN3 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
PKNOX2Q96KN3 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
PKNOX2Q96KN3 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PKNOX2Q96KN3 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC19.68■□□□□ 0.74
PKNOX2Q96KN3 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PKNOX2Q96KN3 AC027612.3-201ENST00000413684 1047 ntBASIC19.68■□□□□ 0.74
PKNOX2Q96KN3 CASP6-205ENST00000505486 538 ntTSL 4 BASIC19.68■□□□□ 0.74
PKNOX2Q96KN3 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC19.68■□□□□ 0.74
PKNOX2Q96KN3 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PKNOX2Q96KN3 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
PKNOX2Q96KN3 CALHM1-201ENST00000329905 3053 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PKNOX2Q96KN3 AC019069.1-201ENST00000610008 1333 ntBASIC19.68■□□□□ 0.74
PKNOX2Q96KN3 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PKNOX2Q96KN3 AC105917.1-201ENST00000506637 2539 ntBASIC19.68■□□□□ 0.74
PKNOX2Q96KN3 EGR2-202ENST00000411732 2824 ntTSL 2 BASIC19.68■□□□□ 0.74
PKNOX2Q96KN3 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC19.68■□□□□ 0.74
PKNOX2Q96KN3 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PKNOX2Q96KN3 FP475955.4-201ENST00000623131 1990 ntBASIC19.68■□□□□ 0.74
PKNOX2Q96KN3 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
PKNOX2Q96KN3 LINC02228-203ENST00000641970 1355 ntBASIC19.68■□□□□ 0.74
PKNOX2Q96KN3 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
PKNOX2Q96KN3 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PKNOX2Q96KN3 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC19.68■□□□□ 0.74
PKNOX2Q96KN3 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC19.68■□□□□ 0.74
PKNOX2Q96KN3 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
PKNOX2Q96KN3 AC073869.1-201ENST00000415574 2762 ntBASIC19.67■□□□□ 0.74
PKNOX2Q96KN3 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC19.67■□□□□ 0.74
PKNOX2Q96KN3 CYP21A1P-202ENST00000354927 1481 ntBASIC19.67■□□□□ 0.74
PKNOX2Q96KN3 ZDHHC8-203ENST00000405930 3112 ntTSL 2 BASIC19.67■□□□□ 0.74
PKNOX2Q96KN3 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PKNOX2Q96KN3 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PKNOX2Q96KN3 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
PKNOX2Q96KN3 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
PKNOX2Q96KN3 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PKNOX2Q96KN3 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
PKNOX2Q96KN3 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC19.67■□□□□ 0.74
PKNOX2Q96KN3 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
PKNOX2Q96KN3 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
PKNOX2Q96KN3 NALT1-201ENST00000429224 738 ntTSL 5 BASIC19.67■□□□□ 0.74
PKNOX2Q96KN3 VMO1-204ENST00000441199 741 ntTSL 2 BASIC19.67■□□□□ 0.74
PKNOX2Q96KN3 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC19.67■□□□□ 0.74
PKNOX2Q96KN3 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
PKNOX2Q96KN3 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
PKNOX2Q96KN3 AC007686.3-201ENST00000619017 3487 ntBASIC19.67■□□□□ 0.74
PKNOX2Q96KN3 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
PKNOX2Q96KN3 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
PKNOX2Q96KN3 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
PKNOX2Q96KN3 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
PKNOX2Q96KN3 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
PKNOX2Q96KN3 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PKNOX2Q96KN3 LRRC41-208ENST00000617760 2158 ntTSL 5 BASIC19.67■□□□□ 0.74
PKNOX2Q96KN3 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC19.67■□□□□ 0.74
PKNOX2Q96KN3 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
PKNOX2Q96KN3 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
PKNOX2Q96KN3 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
PKNOX2Q96KN3 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
PKNOX2Q96KN3 NLRP13-201ENST00000342929 3132 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
PKNOX2Q96KN3 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PKNOX2Q96KN3 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC19.66■□□□□ 0.74
PKNOX2Q96KN3 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC19.66■□□□□ 0.74
PKNOX2Q96KN3 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PKNOX2Q96KN3 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
PKNOX2Q96KN3 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
PKNOX2Q96KN3 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PKNOX2Q96KN3 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC19.66■□□□□ 0.74
PKNOX2Q96KN3 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PKNOX2Q96KN3 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
PKNOX2Q96KN3 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PKNOX2Q96KN3 ARMC5-205ENST00000563544 3549 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
PKNOX2Q96KN3 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
PKNOX2Q96KN3 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
PKNOX2Q96KN3 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms