Protein–RNA interactions for Protein: Q96DD0

LRRC39, Leucine-rich repeat-containing protein 39, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC39Q96DD0 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
LRRC39Q96DD0 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
LRRC39Q96DD0 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
LRRC39Q96DD0 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
LRRC39Q96DD0 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
LRRC39Q96DD0 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
LRRC39Q96DD0 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC18.37■□□□□ 0.53
LRRC39Q96DD0 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
LRRC39Q96DD0 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
LRRC39Q96DD0 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
LRRC39Q96DD0 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC18.37■□□□□ 0.53
LRRC39Q96DD0 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC18.37■□□□□ 0.53
LRRC39Q96DD0 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
LRRC39Q96DD0 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC18.37■□□□□ 0.53
LRRC39Q96DD0 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC18.37■□□□□ 0.53
LRRC39Q96DD0 C2orf69P3-201ENST00000565542 1120 ntBASIC18.37■□□□□ 0.53
LRRC39Q96DD0 MIR4785-201ENST00000585005 73 ntBASIC18.37■□□□□ 0.53
LRRC39Q96DD0 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
LRRC39Q96DD0 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
LRRC39Q96DD0 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC18.37■□□□□ 0.53
LRRC39Q96DD0 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
LRRC39Q96DD0 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
LRRC39Q96DD0 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
LRRC39Q96DD0 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
LRRC39Q96DD0 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
LRRC39Q96DD0 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC18.37■□□□□ 0.53
LRRC39Q96DD0 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
LRRC39Q96DD0 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
LRRC39Q96DD0 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
LRRC39Q96DD0 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
LRRC39Q96DD0 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
LRRC39Q96DD0 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC18.36■□□□□ 0.53
LRRC39Q96DD0 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC18.36■□□□□ 0.53
LRRC39Q96DD0 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
LRRC39Q96DD0 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC18.36■□□□□ 0.53
LRRC39Q96DD0 MIR718-201ENST00000390190 70 ntBASIC18.36■□□□□ 0.53
LRRC39Q96DD0 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
LRRC39Q96DD0 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC18.36■□□□□ 0.53
LRRC39Q96DD0 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
LRRC39Q96DD0 USP36-216ENST00000589424 970 ntTSL 5 BASIC18.36■□□□□ 0.53
LRRC39Q96DD0 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
LRRC39Q96DD0 AC008687.5-201ENST00000593746 558 ntBASIC18.36■□□□□ 0.53
LRRC39Q96DD0 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC18.36■□□□□ 0.53
LRRC39Q96DD0 AC010240.3-201ENST00000607688 395 ntBASIC18.36■□□□□ 0.53
LRRC39Q96DD0 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC18.36■□□□□ 0.53
LRRC39Q96DD0 CEP83-AS1-201ENST00000623122 2482 ntBASIC18.36■□□□□ 0.53
LRRC39Q96DD0 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
LRRC39Q96DD0 HTR7P1-202ENST00000624664 4411 ntBASIC18.35■□□□□ 0.53
LRRC39Q96DD0 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC18.35■□□□□ 0.53
LRRC39Q96DD0 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
LRRC39Q96DD0 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC18.35■□□□□ 0.53
LRRC39Q96DD0 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC18.35■□□□□ 0.53
LRRC39Q96DD0 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
LRRC39Q96DD0 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
LRRC39Q96DD0 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
LRRC39Q96DD0 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
LRRC39Q96DD0 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC18.35■□□□□ 0.53
LRRC39Q96DD0 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC18.35■□□□□ 0.53
LRRC39Q96DD0 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
LRRC39Q96DD0 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
LRRC39Q96DD0 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
LRRC39Q96DD0 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
LRRC39Q96DD0 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
LRRC39Q96DD0 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
LRRC39Q96DD0 BAALC-201ENST00000297574 801 ntTSL 3 BASIC18.35■□□□□ 0.53
LRRC39Q96DD0 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
LRRC39Q96DD0 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC18.35■□□□□ 0.53
LRRC39Q96DD0 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
LRRC39Q96DD0 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC18.35■□□□□ 0.53
LRRC39Q96DD0 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
LRRC39Q96DD0 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC18.35■□□□□ 0.53
LRRC39Q96DD0 DHDH-203ENST00000522614 776 ntTSL 5 BASIC18.35■□□□□ 0.53
LRRC39Q96DD0 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC18.35■□□□□ 0.53
LRRC39Q96DD0 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC18.35■□□□□ 0.53
LRRC39Q96DD0 FST-202ENST00000396947 2538 ntTSL 5 BASIC18.35■□□□□ 0.53
LRRC39Q96DD0 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
LRRC39Q96DD0 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
LRRC39Q96DD0 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
LRRC39Q96DD0 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
LRRC39Q96DD0 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
LRRC39Q96DD0 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
LRRC39Q96DD0 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
LRRC39Q96DD0 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC18.34■□□□□ 0.53
LRRC39Q96DD0 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC18.34■□□□□ 0.53
LRRC39Q96DD0 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
LRRC39Q96DD0 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
LRRC39Q96DD0 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
LRRC39Q96DD0 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC18.34■□□□□ 0.53
LRRC39Q96DD0 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
LRRC39Q96DD0 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
LRRC39Q96DD0 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
LRRC39Q96DD0 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
LRRC39Q96DD0 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
LRRC39Q96DD0 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
LRRC39Q96DD0 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
LRRC39Q96DD0 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC18.34■□□□□ 0.53
LRRC39Q96DD0 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
LRRC39Q96DD0 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
LRRC39Q96DD0 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
LRRC39Q96DD0 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms