Protein–RNA interactions for Protein: Q96DC8

ECHDC3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, humanhuman

Predictions only

Length 303 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3Q96DC8 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
ECHDC3Q96DC8 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC18.15■□□□□ 0.5
ECHDC3Q96DC8 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC18.15■□□□□ 0.5
ECHDC3Q96DC8 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC18.15■□□□□ 0.5
ECHDC3Q96DC8 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
ECHDC3Q96DC8 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC18.15■□□□□ 0.5
ECHDC3Q96DC8 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
ECHDC3Q96DC8 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC18.15■□□□□ 0.5
ECHDC3Q96DC8 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
ECHDC3Q96DC8 FLYWCH1P1-201ENST00000460917 1874 ntBASIC18.15■□□□□ 0.5
ECHDC3Q96DC8 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
ECHDC3Q96DC8 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC18.15■□□□□ 0.5
ECHDC3Q96DC8 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC18.15■□□□□ 0.5
ECHDC3Q96DC8 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
ECHDC3Q96DC8 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
ECHDC3Q96DC8 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
ECHDC3Q96DC8 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
ECHDC3Q96DC8 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
ECHDC3Q96DC8 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC18.15■□□□□ 0.5
ECHDC3Q96DC8 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
ECHDC3Q96DC8 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC18.14■□□□□ 0.5
ECHDC3Q96DC8 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC18.14■□□□□ 0.5
ECHDC3Q96DC8 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.5
ECHDC3Q96DC8 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
ECHDC3Q96DC8 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
ECHDC3Q96DC8 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
ECHDC3Q96DC8 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
ECHDC3Q96DC8 BICD1-207ENST00000551848 1962 ntBASIC18.14■□□□□ 0.49
ECHDC3Q96DC8 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
ECHDC3Q96DC8 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC18.14■□□□□ 0.49
ECHDC3Q96DC8 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
ECHDC3Q96DC8 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
ECHDC3Q96DC8 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC18.14■□□□□ 0.49
ECHDC3Q96DC8 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC18.14■□□□□ 0.49
ECHDC3Q96DC8 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
ECHDC3Q96DC8 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC18.14■□□□□ 0.49
ECHDC3Q96DC8 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
ECHDC3Q96DC8 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC18.14■□□□□ 0.49
ECHDC3Q96DC8 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC18.14■□□□□ 0.49
ECHDC3Q96DC8 AC233702.3-201ENST00000578656 1387 ntBASIC18.14■□□□□ 0.49
ECHDC3Q96DC8 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
ECHDC3Q96DC8 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC18.14■□□□□ 0.49
ECHDC3Q96DC8 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
ECHDC3Q96DC8 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
ECHDC3Q96DC8 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
ECHDC3Q96DC8 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
ECHDC3Q96DC8 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
ECHDC3Q96DC8 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC18.13■□□□□ 0.49
ECHDC3Q96DC8 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC18.13■□□□□ 0.49
ECHDC3Q96DC8 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
ECHDC3Q96DC8 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
ECHDC3Q96DC8 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC18.13■□□□□ 0.49
ECHDC3Q96DC8 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
ECHDC3Q96DC8 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
ECHDC3Q96DC8 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
ECHDC3Q96DC8 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
ECHDC3Q96DC8 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
ECHDC3Q96DC8 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC18.13■□□□□ 0.49
ECHDC3Q96DC8 MTCL1P1-201ENST00000446207 792 ntBASIC18.13■□□□□ 0.49
ECHDC3Q96DC8 TOB2P1-201ENST00000469761 992 ntBASIC18.13■□□□□ 0.49
ECHDC3Q96DC8 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC18.13■□□□□ 0.49
ECHDC3Q96DC8 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC18.13■□□□□ 0.49
ECHDC3Q96DC8 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC18.13■□□□□ 0.49
ECHDC3Q96DC8 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
ECHDC3Q96DC8 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
ECHDC3Q96DC8 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
ECHDC3Q96DC8 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC18.13■□□□□ 0.49
ECHDC3Q96DC8 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC18.13■□□□□ 0.49
ECHDC3Q96DC8 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
ECHDC3Q96DC8 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC18.13■□□□□ 0.49
ECHDC3Q96DC8 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
ECHDC3Q96DC8 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
ECHDC3Q96DC8 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC18.13■□□□□ 0.49
ECHDC3Q96DC8 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
ECHDC3Q96DC8 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
ECHDC3Q96DC8 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
ECHDC3Q96DC8 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
ECHDC3Q96DC8 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
ECHDC3Q96DC8 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
ECHDC3Q96DC8 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC18.12■□□□□ 0.49
ECHDC3Q96DC8 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
ECHDC3Q96DC8 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
ECHDC3Q96DC8 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
ECHDC3Q96DC8 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC18.12■□□□□ 0.49
ECHDC3Q96DC8 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC18.12■□□□□ 0.49
ECHDC3Q96DC8 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
ECHDC3Q96DC8 LINC00265-3P-201ENST00000447588 903 ntBASIC18.12■□□□□ 0.49
ECHDC3Q96DC8 KRT18P56-201ENST00000507275 550 ntBASIC18.12■□□□□ 0.49
ECHDC3Q96DC8 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC18.12■□□□□ 0.49
ECHDC3Q96DC8 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC18.12■□□□□ 0.49
ECHDC3Q96DC8 AP005901.3-202ENST00000581653 237 ntBASIC18.12■□□□□ 0.49
ECHDC3Q96DC8 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
ECHDC3Q96DC8 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
ECHDC3Q96DC8 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
ECHDC3Q96DC8 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
ECHDC3Q96DC8 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC18.12■□□□□ 0.49
ECHDC3Q96DC8 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
ECHDC3Q96DC8 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC18.12■□□□□ 0.49
ECHDC3Q96DC8 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC18.12■□□□□ 0.49
ECHDC3Q96DC8 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms