Protein–RNA interactions for Protein: Q93084

ATP2A3, Sarcoplasmic/endoplasmic reticulum calcium ATPase 3, humanhuman

Predictions only

Length 1,043 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A3Q93084 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ATP2A3Q93084 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC19.16■□□□□ 0.66
ATP2A3Q93084 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ATP2A3Q93084 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
ATP2A3Q93084 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
ATP2A3Q93084 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC19.16■□□□□ 0.66
ATP2A3Q93084 AC026396.1-201ENST00000419388 421 ntBASIC19.16■□□□□ 0.66
ATP2A3Q93084 AP002383.4-201ENST00000442518 975 ntBASIC19.16■□□□□ 0.66
ATP2A3Q93084 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
ATP2A3Q93084 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC19.16■□□□□ 0.66
ATP2A3Q93084 MIR3180-1-201ENST00000580374 94 ntBASIC19.16■□□□□ 0.66
ATP2A3Q93084 MIR3180-3-201ENST00000584616 94 ntBASIC19.16■□□□□ 0.66
ATP2A3Q93084 AP002414.4-201ENST00000589764 1148 ntBASIC19.16■□□□□ 0.66
ATP2A3Q93084 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
ATP2A3Q93084 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC19.16■□□□□ 0.66
ATP2A3Q93084 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC19.16■□□□□ 0.66
ATP2A3Q93084 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC19.16■□□□□ 0.66
ATP2A3Q93084 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC19.16■□□□□ 0.66
ATP2A3Q93084 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ATP2A3Q93084 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ATP2A3Q93084 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
ATP2A3Q93084 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ATP2A3Q93084 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ATP2A3Q93084 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
ATP2A3Q93084 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
ATP2A3Q93084 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
ATP2A3Q93084 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ATP2A3Q93084 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ATP2A3Q93084 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
ATP2A3Q93084 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ATP2A3Q93084 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC19.15■□□□□ 0.66
ATP2A3Q93084 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
ATP2A3Q93084 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
ATP2A3Q93084 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
ATP2A3Q93084 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ATP2A3Q93084 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
ATP2A3Q93084 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
ATP2A3Q93084 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC19.15■□□□□ 0.66
ATP2A3Q93084 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ATP2A3Q93084 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC19.15■□□□□ 0.66
ATP2A3Q93084 MIR3180-4-201ENST00000582223 153 ntBASIC19.15■□□□□ 0.66
ATP2A3Q93084 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC19.15■□□□□ 0.66
ATP2A3Q93084 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC19.15■□□□□ 0.66
ATP2A3Q93084 WDR88-203ENST00000592765 651 ntTSL 5 BASIC19.15■□□□□ 0.66
ATP2A3Q93084 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ATP2A3Q93084 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC19.15■□□□□ 0.66
ATP2A3Q93084 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ATP2A3Q93084 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC19.15■□□□□ 0.66
ATP2A3Q93084 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ATP2A3Q93084 PKD1P1-201ENST00000458669 6805 ntBASIC19.15■□□□□ 0.66
ATP2A3Q93084 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ATP2A3Q93084 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
ATP2A3Q93084 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
ATP2A3Q93084 AC104581.1-202ENST00000635932 2618 ntBASIC19.15■□□□□ 0.66
ATP2A3Q93084 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ATP2A3Q93084 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ATP2A3Q93084 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC19.15■□□□□ 0.66
ATP2A3Q93084 AC090164.3-201ENST00000610780 2143 ntBASIC19.15■□□□□ 0.66
ATP2A3Q93084 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ATP2A3Q93084 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
ATP2A3Q93084 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC19.14■□□□□ 0.66
ATP2A3Q93084 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC19.14■□□□□ 0.66
ATP2A3Q93084 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
ATP2A3Q93084 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.65
ATP2A3Q93084 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
ATP2A3Q93084 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
ATP2A3Q93084 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
ATP2A3Q93084 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC19.14■□□□□ 0.65
ATP2A3Q93084 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
ATP2A3Q93084 SDHD-206ENST00000528182 754 ntTSL 3 BASIC19.14■□□□□ 0.65
ATP2A3Q93084 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
ATP2A3Q93084 LITAF-220ENST00000620789 692 ntTSL 5 BASIC19.14■□□□□ 0.65
ATP2A3Q93084 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
ATP2A3Q93084 WIZP1-201ENST00000531444 2299 ntBASIC19.14■□□□□ 0.65
ATP2A3Q93084 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC19.14■□□□□ 0.65
ATP2A3Q93084 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
ATP2A3Q93084 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
ATP2A3Q93084 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
ATP2A3Q93084 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
ATP2A3Q93084 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
ATP2A3Q93084 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
ATP2A3Q93084 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC19.14■□□□□ 0.65
ATP2A3Q93084 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC19.14■□□□□ 0.65
ATP2A3Q93084 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
ATP2A3Q93084 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC19.14■□□□□ 0.65
ATP2A3Q93084 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC19.14■□□□□ 0.65
ATP2A3Q93084 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC19.14■□□□□ 0.65
ATP2A3Q93084 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
ATP2A3Q93084 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
ATP2A3Q93084 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
ATP2A3Q93084 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
ATP2A3Q93084 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
ATP2A3Q93084 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
ATP2A3Q93084 USP49-202ENST00000373010 2446 ntTSL 5 BASIC19.13■□□□□ 0.65
ATP2A3Q93084 AC009113.1-201ENST00000570267 2443 ntBASIC19.13■□□□□ 0.65
ATP2A3Q93084 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
ATP2A3Q93084 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
ATP2A3Q93084 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
ATP2A3Q93084 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
ATP2A3Q93084 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms