Protein–RNA interactions for Protein: Q92544

TM9SF4, Transmembrane 9 superfamily member 4, humanhuman

Predictions only

Length 642 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4Q92544 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC17.18■□□□□ 0.34
TM9SF4Q92544 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC17.18■□□□□ 0.34
TM9SF4Q92544 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
TM9SF4Q92544 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
TM9SF4Q92544 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
TM9SF4Q92544 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TM9SF4Q92544 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TM9SF4Q92544 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC17.18■□□□□ 0.34
TM9SF4Q92544 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
TM9SF4Q92544 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
TM9SF4Q92544 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
TM9SF4Q92544 CHCHD2P8-201ENST00000429873 447 ntBASIC17.18■□□□□ 0.34
TM9SF4Q92544 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
TM9SF4Q92544 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
TM9SF4Q92544 IL11-204ENST00000590625 1028 ntTSL 2 BASIC17.18■□□□□ 0.34
TM9SF4Q92544 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
TM9SF4Q92544 AC012313.10-201ENST00000623509 926 ntBASIC17.18■□□□□ 0.34
TM9SF4Q92544 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC17.18■□□□□ 0.34
TM9SF4Q92544 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TM9SF4Q92544 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TM9SF4Q92544 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
TM9SF4Q92544 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
TM9SF4Q92544 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
TM9SF4Q92544 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
TM9SF4Q92544 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
TM9SF4Q92544 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
TM9SF4Q92544 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
TM9SF4Q92544 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TM9SF4Q92544 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
TM9SF4Q92544 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TM9SF4Q92544 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
TM9SF4Q92544 AC016734.2-201ENST00000624325 1377 ntBASIC17.17■□□□□ 0.34
TM9SF4Q92544 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TM9SF4Q92544 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TM9SF4Q92544 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC17.17■□□□□ 0.34
TM9SF4Q92544 AL109659.2-201ENST00000606809 1674 ntBASIC17.17■□□□□ 0.34
TM9SF4Q92544 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TM9SF4Q92544 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC17.17■□□□□ 0.34
TM9SF4Q92544 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
TM9SF4Q92544 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TM9SF4Q92544 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
TM9SF4Q92544 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC17.17■□□□□ 0.34
TM9SF4Q92544 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TM9SF4Q92544 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TM9SF4Q92544 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
TM9SF4Q92544 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
TM9SF4Q92544 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC17.17■□□□□ 0.34
TM9SF4Q92544 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
TM9SF4Q92544 HLA-F-220ENST00000434407 884 ntBASIC17.17■□□□□ 0.34
TM9SF4Q92544 FAAHP1-202ENST00000446499 1238 ntBASIC17.17■□□□□ 0.34
TM9SF4Q92544 LINC01711-201ENST00000598340 967 ntBASIC17.17■□□□□ 0.34
TM9SF4Q92544 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC17.17■□□□□ 0.34
TM9SF4Q92544 AL157888.1-201ENST00000631930 593 ntBASIC17.17■□□□□ 0.34
TM9SF4Q92544 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TM9SF4Q92544 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC17.17■□□□□ 0.34
TM9SF4Q92544 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
TM9SF4Q92544 KATNBL1P6-202ENST00000562413 1466 ntBASIC17.17■□□□□ 0.34
TM9SF4Q92544 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
TM9SF4Q92544 AP000997.3-201ENST00000623333 2250 ntBASIC17.17■□□□□ 0.34
TM9SF4Q92544 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TM9SF4Q92544 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
TM9SF4Q92544 FZD10-202ENST00000539839 3282 ntBASIC17.16■□□□□ 0.34
TM9SF4Q92544 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
TM9SF4Q92544 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
TM9SF4Q92544 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TM9SF4Q92544 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TM9SF4Q92544 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC17.16■□□□□ 0.34
TM9SF4Q92544 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TM9SF4Q92544 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
TM9SF4Q92544 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TM9SF4Q92544 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TM9SF4Q92544 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC17.16■□□□□ 0.34
TM9SF4Q92544 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
TM9SF4Q92544 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
TM9SF4Q92544 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TM9SF4Q92544 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC17.16■□□□□ 0.34
TM9SF4Q92544 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TM9SF4Q92544 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TM9SF4Q92544 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
TM9SF4Q92544 NUS1P1-201ENST00000446295 882 ntBASIC17.16■□□□□ 0.34
TM9SF4Q92544 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC17.16■□□□□ 0.34
TM9SF4Q92544 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC17.16■□□□□ 0.34
TM9SF4Q92544 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC17.16■□□□□ 0.34
TM9SF4Q92544 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
TM9SF4Q92544 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
TM9SF4Q92544 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC17.16■□□□□ 0.34
TM9SF4Q92544 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC17.16■□□□□ 0.34
TM9SF4Q92544 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
TM9SF4Q92544 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
TM9SF4Q92544 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC17.16■□□□□ 0.34
TM9SF4Q92544 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC17.16■□□□□ 0.34
TM9SF4Q92544 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TM9SF4Q92544 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TM9SF4Q92544 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
TM9SF4Q92544 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TM9SF4Q92544 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
TM9SF4Q92544 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TM9SF4Q92544 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
TM9SF4Q92544 AL391807.1-203ENST00000604392 2365 ntBASIC17.15■□□□□ 0.34
TM9SF4Q92544 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC17.15■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms