Protein–RNA interactions for Protein: Q8WXH0

SYNE2, Nesprin-2, humanhuman

Known RBP Predictions only

Length 6,885 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2Q8WXH0 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC7.3□□□□□ -1.24
SYNE2Q8WXH0 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
SYNE2Q8WXH0 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
SYNE2Q8WXH0 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC7.3□□□□□ -1.24
SYNE2Q8WXH0 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC7.3□□□□□ -1.24
SYNE2Q8WXH0 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC7.3□□□□□ -1.24
SYNE2Q8WXH0 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
SYNE2Q8WXH0 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
SYNE2Q8WXH0 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC7.3□□□□□ -1.24
SYNE2Q8WXH0 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
SYNE2Q8WXH0 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
SYNE2Q8WXH0 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
SYNE2Q8WXH0 STX1A-203ENST00000395155 783 ntTSL 2 BASIC7.3□□□□□ -1.24
SYNE2Q8WXH0 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC7.3□□□□□ -1.24
SYNE2Q8WXH0 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC7.3□□□□□ -1.24
SYNE2Q8WXH0 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
SYNE2Q8WXH0 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC7.3□□□□□ -1.24
SYNE2Q8WXH0 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC7.29□□□□□ -1.24
SYNE2Q8WXH0 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
SYNE2Q8WXH0 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC7.29□□□□□ -1.24
SYNE2Q8WXH0 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC7.29□□□□□ -1.24
SYNE2Q8WXH0 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
SYNE2Q8WXH0 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC7.29□□□□□ -1.24
SYNE2Q8WXH0 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC7.29□□□□□ -1.24
SYNE2Q8WXH0 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC7.29□□□□□ -1.24
SYNE2Q8WXH0 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC7.29□□□□□ -1.24
SYNE2Q8WXH0 INE1-201ENST00000456273 945 ntBASIC7.29□□□□□ -1.24
SYNE2Q8WXH0 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC7.29□□□□□ -1.24
SYNE2Q8WXH0 WNT11-204ENST00000621122 789 ntTSL 5 BASIC7.29□□□□□ -1.24
SYNE2Q8WXH0 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC7.29□□□□□ -1.24
SYNE2Q8WXH0 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC7.29□□□□□ -1.24
SYNE2Q8WXH0 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC7.29□□□□□ -1.24
SYNE2Q8WXH0 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC7.29□□□□□ -1.24
SYNE2Q8WXH0 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
SYNE2Q8WXH0 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC7.29□□□□□ -1.24
SYNE2Q8WXH0 AL136361.1-201ENST00000435429 506 ntTSL 3 BASIC7.29□□□□□ -1.24
SYNE2Q8WXH0 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC7.29□□□□□ -1.24
SYNE2Q8WXH0 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC7.29□□□□□ -1.24
SYNE2Q8WXH0 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
SYNE2Q8WXH0 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
SYNE2Q8WXH0 AL627223.1-201ENST00000416693 442 ntBASIC7.29□□□□□ -1.24
SYNE2Q8WXH0 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC7.29□□□□□ -1.24
SYNE2Q8WXH0 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
SYNE2Q8WXH0 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
SYNE2Q8WXH0 AC023141.13-201ENST00000604991 943 ntBASIC7.29□□□□□ -1.24
SYNE2Q8WXH0 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC7.29□□□□□ -1.24
SYNE2Q8WXH0 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC7.29□□□□□ -1.24
SYNE2Q8WXH0 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
SYNE2Q8WXH0 AC079776.2-201ENST00000641154 1609 ntBASIC7.29□□□□□ -1.24
SYNE2Q8WXH0 CLDN5-201ENST00000403084 2357 ntBASIC7.29□□□□□ -1.24
SYNE2Q8WXH0 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
SYNE2Q8WXH0 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC7.29□□□□□ -1.24
SYNE2Q8WXH0 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC7.29□□□□□ -1.24
SYNE2Q8WXH0 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
SYNE2Q8WXH0 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
SYNE2Q8WXH0 PSMB4-201ENST00000290541 964 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
SYNE2Q8WXH0 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC7.29□□□□□ -1.24
SYNE2Q8WXH0 AC104794.3-201ENST00000566840 1248 ntBASIC7.29□□□□□ -1.24
SYNE2Q8WXH0 AC106872.11-201ENST00000605838 421 ntBASIC7.29□□□□□ -1.24
SYNE2Q8WXH0 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC7.29□□□□□ -1.24
SYNE2Q8WXH0 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC7.29□□□□□ -1.24
SYNE2Q8WXH0 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
SYNE2Q8WXH0 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC7.29□□□□□ -1.24
SYNE2Q8WXH0 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
SYNE2Q8WXH0 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC7.29□□□□□ -1.24
SYNE2Q8WXH0 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
SYNE2Q8WXH0 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC7.29□□□□□ -1.24
SYNE2Q8WXH0 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC7.29□□□□□ -1.24
SYNE2Q8WXH0 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC7.29□□□□□ -1.24
SYNE2Q8WXH0 AC009237.14-201ENST00000609975 1594 ntBASIC7.29□□□□□ -1.24
SYNE2Q8WXH0 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
SYNE2Q8WXH0 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
SYNE2Q8WXH0 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
SYNE2Q8WXH0 BANF1-202ENST00000445560 946 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
SYNE2Q8WXH0 PPP6R2P1-201ENST00000450880 1275 ntBASIC7.28□□□□□ -1.24
SYNE2Q8WXH0 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC7.28□□□□□ -1.24
SYNE2Q8WXH0 NME1-207ENST00000480143 964 ntTSL 2 BASIC7.28□□□□□ -1.24
SYNE2Q8WXH0 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC7.28□□□□□ -1.24
SYNE2Q8WXH0 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC7.28□□□□□ -1.24
SYNE2Q8WXH0 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC7.28□□□□□ -1.24
SYNE2Q8WXH0 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC7.28□□□□□ -1.24
SYNE2Q8WXH0 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC7.28□□□□□ -1.24
SYNE2Q8WXH0 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
SYNE2Q8WXH0 KRT89P-201ENST00000620027 1478 ntBASIC7.28□□□□□ -1.24
SYNE2Q8WXH0 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
SYNE2Q8WXH0 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
SYNE2Q8WXH0 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
SYNE2Q8WXH0 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC7.28□□□□□ -1.24
SYNE2Q8WXH0 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC7.28□□□□□ -1.24
SYNE2Q8WXH0 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
SYNE2Q8WXH0 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
SYNE2Q8WXH0 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC7.28□□□□□ -1.24
SYNE2Q8WXH0 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC7.28□□□□□ -1.24
SYNE2Q8WXH0 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC7.28□□□□□ -1.24
SYNE2Q8WXH0 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC7.28□□□□□ -1.24
SYNE2Q8WXH0 SPCS2P4-201ENST00000436160 681 ntBASIC7.28□□□□□ -1.24
SYNE2Q8WXH0 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC7.28□□□□□ -1.24
SYNE2Q8WXH0 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC7.28□□□□□ -1.24
SYNE2Q8WXH0 AC092919.2-201ENST00000623631 1645 ntBASIC7.28□□□□□ -1.24
SYNE2Q8WXH0 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC7.28□□□□□ -1.24
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms