Protein–RNA interactions for Protein: Q8WXE1

ATRIP, ATR-interacting protein, humanhuman

Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATRIPQ8WXE1 ECEL1P2-202ENST00000465689 757 ntBASIC20.04■□□□□ 0.8
ATRIPQ8WXE1 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
ATRIPQ8WXE1 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC20.04■□□□□ 0.8
ATRIPQ8WXE1 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC20.04■□□□□ 0.8
ATRIPQ8WXE1 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC20.04■□□□□ 0.8
ATRIPQ8WXE1 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
ATRIPQ8WXE1 AL031985.4-201ENST00000642138 673 ntBASIC20.04■□□□□ 0.8
ATRIPQ8WXE1 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
ATRIPQ8WXE1 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
ATRIPQ8WXE1 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
ATRIPQ8WXE1 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
ATRIPQ8WXE1 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
ATRIPQ8WXE1 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
ATRIPQ8WXE1 AL357033.4-201ENST00000617703 1807 ntBASIC20.04■□□□□ 0.8
ATRIPQ8WXE1 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC20.04■□□□□ 0.8
ATRIPQ8WXE1 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
ATRIPQ8WXE1 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
ATRIPQ8WXE1 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
ATRIPQ8WXE1 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC20.04■□□□□ 0.8
ATRIPQ8WXE1 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC20.04■□□□□ 0.8
ATRIPQ8WXE1 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC20.03■□□□□ 0.8
ATRIPQ8WXE1 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC20.03■□□□□ 0.8
ATRIPQ8WXE1 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC20.03■□□□□ 0.8
ATRIPQ8WXE1 REXO1L9P-201ENST00000604264 2108 ntBASIC20.03■□□□□ 0.8
ATRIPQ8WXE1 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC20.03■□□□□ 0.8
ATRIPQ8WXE1 PCDHA12-202ENST00000613593 2588 ntBASIC20.03■□□□□ 0.8
ATRIPQ8WXE1 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
ATRIPQ8WXE1 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
ATRIPQ8WXE1 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
ATRIPQ8WXE1 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
ATRIPQ8WXE1 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
ATRIPQ8WXE1 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC20.03■□□□□ 0.8
ATRIPQ8WXE1 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
ATRIPQ8WXE1 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC20.03■□□□□ 0.8
ATRIPQ8WXE1 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
ATRIPQ8WXE1 AC063952.2-201ENST00000498792 1227 ntBASIC20.03■□□□□ 0.8
ATRIPQ8WXE1 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC20.03■□□□□ 0.8
ATRIPQ8WXE1 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC20.03■□□□□ 0.8
ATRIPQ8WXE1 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC20.03■□□□□ 0.8
ATRIPQ8WXE1 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC20.03■□□□□ 0.8
ATRIPQ8WXE1 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC20.03■□□□□ 0.8
ATRIPQ8WXE1 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
ATRIPQ8WXE1 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
ATRIPQ8WXE1 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
ATRIPQ8WXE1 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
ATRIPQ8WXE1 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
ATRIPQ8WXE1 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC20.03■□□□□ 0.8
ATRIPQ8WXE1 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
ATRIPQ8WXE1 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC20.03■□□□□ 0.8
ATRIPQ8WXE1 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
ATRIPQ8WXE1 BCL2-203ENST00000589955 5011 ntBASIC20.03■□□□□ 0.8
ATRIPQ8WXE1 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC20.03■□□□□ 0.8
ATRIPQ8WXE1 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC20.03■□□□□ 0.8
ATRIPQ8WXE1 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
ATRIPQ8WXE1 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
ATRIPQ8WXE1 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
ATRIPQ8WXE1 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
ATRIPQ8WXE1 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
ATRIPQ8WXE1 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
ATRIPQ8WXE1 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
ATRIPQ8WXE1 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
ATRIPQ8WXE1 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
ATRIPQ8WXE1 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
ATRIPQ8WXE1 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
ATRIPQ8WXE1 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC20.02■□□□□ 0.8
ATRIPQ8WXE1 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
ATRIPQ8WXE1 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC20.02■□□□□ 0.8
ATRIPQ8WXE1 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
ATRIPQ8WXE1 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
ATRIPQ8WXE1 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
ATRIPQ8WXE1 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
ATRIPQ8WXE1 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC20.02■□□□□ 0.8
ATRIPQ8WXE1 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
ATRIPQ8WXE1 Z85996.1-201ENST00000494644 937 ntBASIC20.02■□□□□ 0.8
ATRIPQ8WXE1 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
ATRIPQ8WXE1 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
ATRIPQ8WXE1 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
ATRIPQ8WXE1 KRT8P32-201ENST00000512863 1461 ntBASIC20.02■□□□□ 0.8
ATRIPQ8WXE1 FSCN1P1-201ENST00000568912 1481 ntBASIC20.02■□□□□ 0.8
ATRIPQ8WXE1 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
ATRIPQ8WXE1 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC20.02■□□□□ 0.8
ATRIPQ8WXE1 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC20.02■□□□□ 0.8
ATRIPQ8WXE1 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
ATRIPQ8WXE1 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
ATRIPQ8WXE1 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
ATRIPQ8WXE1 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC20.02■□□□□ 0.79
ATRIPQ8WXE1 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC20.02■□□□□ 0.79
ATRIPQ8WXE1 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
ATRIPQ8WXE1 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
ATRIPQ8WXE1 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
ATRIPQ8WXE1 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC20.02■□□□□ 0.79
ATRIPQ8WXE1 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC20.02■□□□□ 0.79
ATRIPQ8WXE1 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
ATRIPQ8WXE1 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
ATRIPQ8WXE1 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
ATRIPQ8WXE1 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC20.01■□□□□ 0.79
ATRIPQ8WXE1 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
ATRIPQ8WXE1 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
ATRIPQ8WXE1 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
ATRIPQ8WXE1 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms