Protein–RNA interactions for Protein: Q8WVM7

STAG1, Cohesin subunit SA-1, humanhuman

Predictions only

Length 1,258 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
STAG1Q8WVM7 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC21.39■■□□□ 1.01
STAG1Q8WVM7 TSPY12P-201ENST00000421279 868 ntBASIC21.39■■□□□ 1.01
STAG1Q8WVM7 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
STAG1Q8WVM7 KRT18P65-201ENST00000439811 1286 ntBASIC21.39■■□□□ 1.01
STAG1Q8WVM7 DUSP5P1-201ENST00000441325 1139 ntBASIC21.39■■□□□ 1.01
STAG1Q8WVM7 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC21.39■■□□□ 1.01
STAG1Q8WVM7 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC21.39■■□□□ 1.01
STAG1Q8WVM7 AC009154.2-201ENST00000621177 724 ntBASIC21.39■■□□□ 1.01
STAG1Q8WVM7 ANKRD20A8P-203ENST00000641373 517 ntBASIC21.39■■□□□ 1.01
STAG1Q8WVM7 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
STAG1Q8WVM7 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
STAG1Q8WVM7 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
STAG1Q8WVM7 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
STAG1Q8WVM7 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC21.39■■□□□ 1.01
STAG1Q8WVM7 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC21.39■■□□□ 1.01
STAG1Q8WVM7 AC135050.7-201ENST00000624508 2218 ntBASIC21.39■■□□□ 1.01
STAG1Q8WVM7 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
STAG1Q8WVM7 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC21.38■■□□□ 1.01
STAG1Q8WVM7 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC21.38■■□□□ 1.01
STAG1Q8WVM7 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
STAG1Q8WVM7 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
STAG1Q8WVM7 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
STAG1Q8WVM7 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
STAG1Q8WVM7 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
STAG1Q8WVM7 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC21.38■■□□□ 1.01
STAG1Q8WVM7 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
STAG1Q8WVM7 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
STAG1Q8WVM7 AC092329.2-201ENST00000598402 547 ntBASIC21.38■■□□□ 1.01
STAG1Q8WVM7 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
STAG1Q8WVM7 AL592071.1-201ENST00000611956 408 ntBASIC21.38■■□□□ 1.01
STAG1Q8WVM7 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
STAG1Q8WVM7 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
STAG1Q8WVM7 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
STAG1Q8WVM7 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC21.38■■□□□ 1.01
STAG1Q8WVM7 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
STAG1Q8WVM7 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC21.37■■□□□ 1.01
STAG1Q8WVM7 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC21.37■■□□□ 1.01
STAG1Q8WVM7 AL354751.1-201ENST00000412768 1863 ntBASIC21.37■■□□□ 1.01
STAG1Q8WVM7 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
STAG1Q8WVM7 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
STAG1Q8WVM7 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC21.37■■□□□ 1.01
STAG1Q8WVM7 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
STAG1Q8WVM7 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC21.37■■□□□ 1.01
STAG1Q8WVM7 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC21.37■■□□□ 1.01
STAG1Q8WVM7 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC21.37■■□□□ 1.01
STAG1Q8WVM7 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
STAG1Q8WVM7 GUSBP12-201ENST00000513727 720 ntBASIC21.37■■□□□ 1.01
STAG1Q8WVM7 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC21.37■■□□□ 1.01
STAG1Q8WVM7 DUTP2-201ENST00000519164 463 ntBASIC21.37■■□□□ 1.01
STAG1Q8WVM7 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
STAG1Q8WVM7 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC21.37■■□□□ 1.01
STAG1Q8WVM7 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
STAG1Q8WVM7 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
STAG1Q8WVM7 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
STAG1Q8WVM7 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC21.37■■□□□ 1.01
STAG1Q8WVM7 ABALON-201ENST00000629058 1903 ntBASIC21.37■■□□□ 1.01
STAG1Q8WVM7 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
STAG1Q8WVM7 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC21.37■■□□□ 1.01
STAG1Q8WVM7 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
STAG1Q8WVM7 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC21.36■■□□□ 1.01
STAG1Q8WVM7 COMP-202ENST00000425807 2292 ntTSL 2 BASIC21.36■■□□□ 1.01
STAG1Q8WVM7 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC21.36■■□□□ 1.01
STAG1Q8WVM7 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC21.36■■□□□ 1.01
STAG1Q8WVM7 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
STAG1Q8WVM7 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
STAG1Q8WVM7 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
STAG1Q8WVM7 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
STAG1Q8WVM7 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
STAG1Q8WVM7 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
STAG1Q8WVM7 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC21.36■■□□□ 1.01
STAG1Q8WVM7 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC21.36■■□□□ 1.01
STAG1Q8WVM7 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
STAG1Q8WVM7 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
STAG1Q8WVM7 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
STAG1Q8WVM7 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC21.36■■□□□ 1.01
STAG1Q8WVM7 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC21.36■■□□□ 1.01
STAG1Q8WVM7 AP002414.4-201ENST00000589764 1148 ntBASIC21.36■■□□□ 1.01
STAG1Q8WVM7 REXO1L9P-201ENST00000604264 2108 ntBASIC21.36■■□□□ 1.01
STAG1Q8WVM7 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC21.36■■□□□ 1.01
STAG1Q8WVM7 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC21.36■■□□□ 1.01
STAG1Q8WVM7 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
STAG1Q8WVM7 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
STAG1Q8WVM7 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
STAG1Q8WVM7 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
STAG1Q8WVM7 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC21.36■■□□□ 1.01
STAG1Q8WVM7 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC21.36■■□□□ 1.01
STAG1Q8WVM7 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC21.36■■□□□ 1.01
STAG1Q8WVM7 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC21.36■■□□□ 1.01
STAG1Q8WVM7 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
STAG1Q8WVM7 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
STAG1Q8WVM7 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC21.35■■□□□ 1.01
STAG1Q8WVM7 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
STAG1Q8WVM7 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
STAG1Q8WVM7 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC21.35■■□□□ 1.01
STAG1Q8WVM7 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
STAG1Q8WVM7 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC21.35■■□□□ 1.01
STAG1Q8WVM7 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
STAG1Q8WVM7 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
STAG1Q8WVM7 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
STAG1Q8WVM7 AL845331.1-201ENST00000424978 1190 ntBASIC21.35■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms