Protein–RNA interactions for Protein: Q8TEC5

SH3RF2, Putative E3 ubiquitin-protein ligase SH3RF2, humanhuman

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF2Q8TEC5 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SH3RF2Q8TEC5 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
SH3RF2Q8TEC5 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SH3RF2Q8TEC5 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
SH3RF2Q8TEC5 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
SH3RF2Q8TEC5 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
SH3RF2Q8TEC5 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
SH3RF2Q8TEC5 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC18.83■□□□□ 0.61
SH3RF2Q8TEC5 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
SH3RF2Q8TEC5 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC18.83■□□□□ 0.61
SH3RF2Q8TEC5 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC18.83■□□□□ 0.61
SH3RF2Q8TEC5 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
SH3RF2Q8TEC5 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC18.83■□□□□ 0.61
SH3RF2Q8TEC5 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC18.83■□□□□ 0.61
SH3RF2Q8TEC5 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
SH3RF2Q8TEC5 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
SH3RF2Q8TEC5 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
SH3RF2Q8TEC5 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC18.83■□□□□ 0.61
SH3RF2Q8TEC5 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SH3RF2Q8TEC5 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
SH3RF2Q8TEC5 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
SH3RF2Q8TEC5 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
SH3RF2Q8TEC5 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
SH3RF2Q8TEC5 KRT16P4-201ENST00000453883 522 ntBASIC18.83■□□□□ 0.6
SH3RF2Q8TEC5 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
SH3RF2Q8TEC5 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC18.83■□□□□ 0.6
SH3RF2Q8TEC5 AL160237.2-201ENST00000556165 472 ntBASIC18.83■□□□□ 0.6
SH3RF2Q8TEC5 BMF-207ENST00000559701 630 ntTSL 3 BASIC18.83■□□□□ 0.6
SH3RF2Q8TEC5 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
SH3RF2Q8TEC5 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC18.83■□□□□ 0.6
SH3RF2Q8TEC5 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SH3RF2Q8TEC5 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SH3RF2Q8TEC5 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
SH3RF2Q8TEC5 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC18.83■□□□□ 0.6
SH3RF2Q8TEC5 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
SH3RF2Q8TEC5 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.6
SH3RF2Q8TEC5 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC18.83■□□□□ 0.6
SH3RF2Q8TEC5 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC18.83■□□□□ 0.6
SH3RF2Q8TEC5 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC18.83■□□□□ 0.6
SH3RF2Q8TEC5 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC18.83■□□□□ 0.6
SH3RF2Q8TEC5 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
SH3RF2Q8TEC5 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC18.83■□□□□ 0.6
SH3RF2Q8TEC5 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
SH3RF2Q8TEC5 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SH3RF2Q8TEC5 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC18.83■□□□□ 0.6
SH3RF2Q8TEC5 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
SH3RF2Q8TEC5 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SH3RF2Q8TEC5 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SH3RF2Q8TEC5 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC18.82■□□□□ 0.6
SH3RF2Q8TEC5 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC18.82■□□□□ 0.6
SH3RF2Q8TEC5 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SH3RF2Q8TEC5 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SH3RF2Q8TEC5 AL138781.2-201ENST00000617896 1843 ntBASIC18.82■□□□□ 0.6
SH3RF2Q8TEC5 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SH3RF2Q8TEC5 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SH3RF2Q8TEC5 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SH3RF2Q8TEC5 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SH3RF2Q8TEC5 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC18.82■□□□□ 0.6
SH3RF2Q8TEC5 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SH3RF2Q8TEC5 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
SH3RF2Q8TEC5 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
SH3RF2Q8TEC5 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SH3RF2Q8TEC5 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
SH3RF2Q8TEC5 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SH3RF2Q8TEC5 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SH3RF2Q8TEC5 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC18.82■□□□□ 0.6
SH3RF2Q8TEC5 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SH3RF2Q8TEC5 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SH3RF2Q8TEC5 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
SH3RF2Q8TEC5 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
SH3RF2Q8TEC5 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC18.81■□□□□ 0.6
SH3RF2Q8TEC5 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
SH3RF2Q8TEC5 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SH3RF2Q8TEC5 AL031598.1-201ENST00000561511 1773 ntBASIC18.81■□□□□ 0.6
SH3RF2Q8TEC5 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SH3RF2Q8TEC5 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SH3RF2Q8TEC5 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC18.81■□□□□ 0.6
SH3RF2Q8TEC5 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SH3RF2Q8TEC5 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
SH3RF2Q8TEC5 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SH3RF2Q8TEC5 ANO7L1-203ENST00000602586 1720 ntBASIC18.81■□□□□ 0.6
SH3RF2Q8TEC5 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
SH3RF2Q8TEC5 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SH3RF2Q8TEC5 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SH3RF2Q8TEC5 SNCG-201ENST00000348795 684 ntTSL 2 BASIC18.81■□□□□ 0.6
SH3RF2Q8TEC5 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SH3RF2Q8TEC5 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SH3RF2Q8TEC5 BNIP3P18-201ENST00000593976 575 ntBASIC18.81■□□□□ 0.6
SH3RF2Q8TEC5 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
SH3RF2Q8TEC5 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
SH3RF2Q8TEC5 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SH3RF2Q8TEC5 AC005082.1-201ENST00000413042 2259 ntBASIC18.81■□□□□ 0.6
SH3RF2Q8TEC5 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC18.81■□□□□ 0.6
SH3RF2Q8TEC5 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC18.81■□□□□ 0.6
SH3RF2Q8TEC5 LINC01126-201ENST00000623515 1646 ntBASIC18.81■□□□□ 0.6
SH3RF2Q8TEC5 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SH3RF2Q8TEC5 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC18.81■□□□□ 0.6
SH3RF2Q8TEC5 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SH3RF2Q8TEC5 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SH3RF2Q8TEC5 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms