Protein–RNA interactions for Protein: Q8TBN0

RAB3IL1, Guanine nucleotide exchange factor for Rab-3A, humanhuman

Predictions only

Length 382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IL1Q8TBN0 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
RAB3IL1Q8TBN0 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC18.15■□□□□ 0.5
RAB3IL1Q8TBN0 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
RAB3IL1Q8TBN0 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
RAB3IL1Q8TBN0 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RAB3IL1Q8TBN0 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RAB3IL1Q8TBN0 PHGDH-209ENST00000641074 1780 ntBASIC18.15■□□□□ 0.5
RAB3IL1Q8TBN0 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RAB3IL1Q8TBN0 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC18.15■□□□□ 0.5
RAB3IL1Q8TBN0 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RAB3IL1Q8TBN0 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC18.15■□□□□ 0.5
RAB3IL1Q8TBN0 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RAB3IL1Q8TBN0 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC18.15■□□□□ 0.5
RAB3IL1Q8TBN0 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
RAB3IL1Q8TBN0 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC18.15■□□□□ 0.5
RAB3IL1Q8TBN0 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
RAB3IL1Q8TBN0 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC18.15■□□□□ 0.5
RAB3IL1Q8TBN0 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC18.15■□□□□ 0.5
RAB3IL1Q8TBN0 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC18.15■□□□□ 0.5
RAB3IL1Q8TBN0 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
RAB3IL1Q8TBN0 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
RAB3IL1Q8TBN0 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
RAB3IL1Q8TBN0 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
RAB3IL1Q8TBN0 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RAB3IL1Q8TBN0 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RAB3IL1Q8TBN0 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC18.15■□□□□ 0.5
RAB3IL1Q8TBN0 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
RAB3IL1Q8TBN0 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
RAB3IL1Q8TBN0 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC18.15■□□□□ 0.5
RAB3IL1Q8TBN0 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC18.15■□□□□ 0.5
RAB3IL1Q8TBN0 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
RAB3IL1Q8TBN0 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC18.15■□□□□ 0.5
RAB3IL1Q8TBN0 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC18.15■□□□□ 0.5
RAB3IL1Q8TBN0 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RAB3IL1Q8TBN0 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
RAB3IL1Q8TBN0 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
RAB3IL1Q8TBN0 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
RAB3IL1Q8TBN0 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC18.14■□□□□ 0.5
RAB3IL1Q8TBN0 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.5
RAB3IL1Q8TBN0 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
RAB3IL1Q8TBN0 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC18.14■□□□□ 0.49
RAB3IL1Q8TBN0 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
RAB3IL1Q8TBN0 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC18.14■□□□□ 0.49
RAB3IL1Q8TBN0 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC18.14■□□□□ 0.49
RAB3IL1Q8TBN0 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
RAB3IL1Q8TBN0 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
RAB3IL1Q8TBN0 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
RAB3IL1Q8TBN0 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC18.14■□□□□ 0.49
RAB3IL1Q8TBN0 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC18.14■□□□□ 0.49
RAB3IL1Q8TBN0 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC18.14■□□□□ 0.49
RAB3IL1Q8TBN0 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
RAB3IL1Q8TBN0 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
RAB3IL1Q8TBN0 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC18.14■□□□□ 0.49
RAB3IL1Q8TBN0 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC18.14■□□□□ 0.49
RAB3IL1Q8TBN0 INO80E-214ENST00000620599 515 ntTSL 2 BASIC18.14■□□□□ 0.49
RAB3IL1Q8TBN0 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC18.14■□□□□ 0.49
RAB3IL1Q8TBN0 AC133041.1-202ENST00000642053 222 ntBASIC18.14■□□□□ 0.49
RAB3IL1Q8TBN0 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
RAB3IL1Q8TBN0 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RAB3IL1Q8TBN0 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RAB3IL1Q8TBN0 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC18.14■□□□□ 0.49
RAB3IL1Q8TBN0 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
RAB3IL1Q8TBN0 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RAB3IL1Q8TBN0 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
RAB3IL1Q8TBN0 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RAB3IL1Q8TBN0 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
RAB3IL1Q8TBN0 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
RAB3IL1Q8TBN0 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RAB3IL1Q8TBN0 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC18.14■□□□□ 0.49
RAB3IL1Q8TBN0 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RAB3IL1Q8TBN0 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC18.13■□□□□ 0.49
RAB3IL1Q8TBN0 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
RAB3IL1Q8TBN0 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RAB3IL1Q8TBN0 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
RAB3IL1Q8TBN0 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
RAB3IL1Q8TBN0 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC18.13■□□□□ 0.49
RAB3IL1Q8TBN0 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC18.13■□□□□ 0.49
RAB3IL1Q8TBN0 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RAB3IL1Q8TBN0 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RAB3IL1Q8TBN0 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC18.13■□□□□ 0.49
RAB3IL1Q8TBN0 AC108860.2-201ENST00000562760 2183 ntBASIC18.13■□□□□ 0.49
RAB3IL1Q8TBN0 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
RAB3IL1Q8TBN0 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RAB3IL1Q8TBN0 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
RAB3IL1Q8TBN0 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RAB3IL1Q8TBN0 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RAB3IL1Q8TBN0 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC18.13■□□□□ 0.49
RAB3IL1Q8TBN0 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
RAB3IL1Q8TBN0 TSPY20P-201ENST00000450910 630 ntBASIC18.13■□□□□ 0.49
RAB3IL1Q8TBN0 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC18.13■□□□□ 0.49
RAB3IL1Q8TBN0 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
RAB3IL1Q8TBN0 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
RAB3IL1Q8TBN0 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
RAB3IL1Q8TBN0 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC18.13■□□□□ 0.49
RAB3IL1Q8TBN0 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
RAB3IL1Q8TBN0 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RAB3IL1Q8TBN0 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RAB3IL1Q8TBN0 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RAB3IL1Q8TBN0 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RAB3IL1Q8TBN0 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms