Protein–RNA interactions for Protein: Q8NFR7

CCDC148, Coiled-coil domain-containing protein 148, humanhuman

Predictions only

Length 591 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC148Q8NFR7 RMI2-205ENST00000576027 818 ntTSL 2 BASIC20.95■□□□□ 0.94
CCDC148Q8NFR7 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC20.95■□□□□ 0.94
CCDC148Q8NFR7 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC20.95■□□□□ 0.94
CCDC148Q8NFR7 AC010331.1-201ENST00000611423 582 ntBASIC20.95■□□□□ 0.94
CCDC148Q8NFR7 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC20.95■□□□□ 0.94
CCDC148Q8NFR7 AL121956.5-201ENST00000625261 221 ntBASIC20.95■□□□□ 0.94
CCDC148Q8NFR7 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
CCDC148Q8NFR7 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CCDC148Q8NFR7 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC20.95■□□□□ 0.94
CCDC148Q8NFR7 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CCDC148Q8NFR7 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CCDC148Q8NFR7 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
CCDC148Q8NFR7 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC20.95■□□□□ 0.94
CCDC148Q8NFR7 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
CCDC148Q8NFR7 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CCDC148Q8NFR7 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CCDC148Q8NFR7 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CCDC148Q8NFR7 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
CCDC148Q8NFR7 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CCDC148Q8NFR7 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CCDC148Q8NFR7 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
CCDC148Q8NFR7 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CCDC148Q8NFR7 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CCDC148Q8NFR7 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CCDC148Q8NFR7 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CCDC148Q8NFR7 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC20.94■□□□□ 0.94
CCDC148Q8NFR7 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC20.94■□□□□ 0.94
CCDC148Q8NFR7 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC20.94■□□□□ 0.94
CCDC148Q8NFR7 AC087388.1-201ENST00000571370 1112 ntBASIC20.94■□□□□ 0.94
CCDC148Q8NFR7 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC20.94■□□□□ 0.94
CCDC148Q8NFR7 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC20.94■□□□□ 0.94
CCDC148Q8NFR7 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CCDC148Q8NFR7 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CCDC148Q8NFR7 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CCDC148Q8NFR7 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
CCDC148Q8NFR7 COMP-202ENST00000425807 2292 ntTSL 2 BASIC20.94■□□□□ 0.94
CCDC148Q8NFR7 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CCDC148Q8NFR7 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC20.94■□□□□ 0.94
CCDC148Q8NFR7 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
CCDC148Q8NFR7 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CCDC148Q8NFR7 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC20.93■□□□□ 0.94
CCDC148Q8NFR7 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC20.93■□□□□ 0.94
CCDC148Q8NFR7 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC20.93■□□□□ 0.94
CCDC148Q8NFR7 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
CCDC148Q8NFR7 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC20.93■□□□□ 0.94
CCDC148Q8NFR7 POR-209ENST00000439269 1858 ntTSL 2 BASIC20.93■□□□□ 0.94
CCDC148Q8NFR7 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CCDC148Q8NFR7 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC20.93■□□□□ 0.94
CCDC148Q8NFR7 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CCDC148Q8NFR7 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC20.93■□□□□ 0.94
CCDC148Q8NFR7 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC20.93■□□□□ 0.94
CCDC148Q8NFR7 AL136038.3-201ENST00000561909 1096 ntBASIC20.93■□□□□ 0.94
CCDC148Q8NFR7 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC20.93■□□□□ 0.94
CCDC148Q8NFR7 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CCDC148Q8NFR7 AC007613.1-201ENST00000572811 2597 ntBASIC20.93■□□□□ 0.94
CCDC148Q8NFR7 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
CCDC148Q8NFR7 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
CCDC148Q8NFR7 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CCDC148Q8NFR7 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC20.93■□□□□ 0.94
CCDC148Q8NFR7 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC20.93■□□□□ 0.94
CCDC148Q8NFR7 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CCDC148Q8NFR7 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
CCDC148Q8NFR7 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
CCDC148Q8NFR7 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC20.93■□□□□ 0.94
CCDC148Q8NFR7 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
CCDC148Q8NFR7 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CCDC148Q8NFR7 FLYWCH1P1-201ENST00000460917 1874 ntBASIC20.92■□□□□ 0.94
CCDC148Q8NFR7 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CCDC148Q8NFR7 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CCDC148Q8NFR7 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC20.92■□□□□ 0.94
CCDC148Q8NFR7 AC135050.7-201ENST00000624508 2218 ntBASIC20.92■□□□□ 0.94
CCDC148Q8NFR7 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
CCDC148Q8NFR7 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
CCDC148Q8NFR7 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CCDC148Q8NFR7 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CCDC148Q8NFR7 HES2-202ENST00000377836 507 ntTSL 2 BASIC20.92■□□□□ 0.94
CCDC148Q8NFR7 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC20.92■□□□□ 0.94
CCDC148Q8NFR7 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC20.92■□□□□ 0.94
CCDC148Q8NFR7 AL645929.1-201ENST00000420084 975 ntBASIC20.92■□□□□ 0.94
CCDC148Q8NFR7 AP003733.1-201ENST00000491725 852 ntBASIC20.92■□□□□ 0.94
CCDC148Q8NFR7 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC20.92■□□□□ 0.94
CCDC148Q8NFR7 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CCDC148Q8NFR7 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CCDC148Q8NFR7 AC093010.1-201ENST00000473625 1624 ntBASIC20.92■□□□□ 0.94
CCDC148Q8NFR7 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CCDC148Q8NFR7 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
CCDC148Q8NFR7 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CCDC148Q8NFR7 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC20.92■□□□□ 0.94
CCDC148Q8NFR7 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC20.92■□□□□ 0.94
CCDC148Q8NFR7 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
CCDC148Q8NFR7 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
CCDC148Q8NFR7 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC20.92■□□□□ 0.94
CCDC148Q8NFR7 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC20.92■□□□□ 0.94
CCDC148Q8NFR7 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CCDC148Q8NFR7 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CCDC148Q8NFR7 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CCDC148Q8NFR7 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CCDC148Q8NFR7 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CCDC148Q8NFR7 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CCDC148Q8NFR7 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC20.91■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 75.1 ms