Protein–RNA interactions for Protein: Q8NDX1

PSD4, PH and SEC7 domain-containing protein 4, humanhuman

Predictions only

Length 1,056 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PSD4Q8NDX1 AL354751.1-201ENST00000412768 1863 ntBASIC17.18■□□□□ 0.34
PSD4Q8NDX1 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
PSD4Q8NDX1 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PSD4Q8NDX1 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC17.18■□□□□ 0.34
PSD4Q8NDX1 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC17.18■□□□□ 0.34
PSD4Q8NDX1 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC17.18■□□□□ 0.34
PSD4Q8NDX1 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC17.18■□□□□ 0.34
PSD4Q8NDX1 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC17.18■□□□□ 0.34
PSD4Q8NDX1 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
PSD4Q8NDX1 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
PSD4Q8NDX1 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
PSD4Q8NDX1 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PSD4Q8NDX1 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC17.18■□□□□ 0.34
PSD4Q8NDX1 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC17.18■□□□□ 0.34
PSD4Q8NDX1 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
PSD4Q8NDX1 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
PSD4Q8NDX1 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC17.18■□□□□ 0.34
PSD4Q8NDX1 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC17.18■□□□□ 0.34
PSD4Q8NDX1 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
PSD4Q8NDX1 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PSD4Q8NDX1 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
PSD4Q8NDX1 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PSD4Q8NDX1 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
PSD4Q8NDX1 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
PSD4Q8NDX1 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
PSD4Q8NDX1 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC17.18■□□□□ 0.34
PSD4Q8NDX1 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PSD4Q8NDX1 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC17.18■□□□□ 0.34
PSD4Q8NDX1 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
PSD4Q8NDX1 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
PSD4Q8NDX1 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
PSD4Q8NDX1 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PSD4Q8NDX1 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
PSD4Q8NDX1 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
PSD4Q8NDX1 AL109659.2-201ENST00000606809 1674 ntBASIC17.17■□□□□ 0.34
PSD4Q8NDX1 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
PSD4Q8NDX1 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
PSD4Q8NDX1 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
PSD4Q8NDX1 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
PSD4Q8NDX1 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
PSD4Q8NDX1 AL031133.1-201ENST00000406807 723 ntBASIC17.17■□□□□ 0.34
PSD4Q8NDX1 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC17.17■□□□□ 0.34
PSD4Q8NDX1 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC17.17■□□□□ 0.34
PSD4Q8NDX1 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC17.17■□□□□ 0.34
PSD4Q8NDX1 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PSD4Q8NDX1 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PSD4Q8NDX1 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PSD4Q8NDX1 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PSD4Q8NDX1 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC17.17■□□□□ 0.34
PSD4Q8NDX1 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC17.17■□□□□ 0.34
PSD4Q8NDX1 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC17.17■□□□□ 0.34
PSD4Q8NDX1 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PSD4Q8NDX1 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC17.17■□□□□ 0.34
PSD4Q8NDX1 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PSD4Q8NDX1 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
PSD4Q8NDX1 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
PSD4Q8NDX1 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
PSD4Q8NDX1 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC17.16■□□□□ 0.34
PSD4Q8NDX1 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC17.16■□□□□ 0.34
PSD4Q8NDX1 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
PSD4Q8NDX1 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
PSD4Q8NDX1 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PSD4Q8NDX1 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
PSD4Q8NDX1 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PSD4Q8NDX1 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
PSD4Q8NDX1 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PSD4Q8NDX1 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC17.16■□□□□ 0.34
PSD4Q8NDX1 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC17.16■□□□□ 0.34
PSD4Q8NDX1 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
PSD4Q8NDX1 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC17.16■□□□□ 0.34
PSD4Q8NDX1 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PSD4Q8NDX1 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC17.16■□□□□ 0.34
PSD4Q8NDX1 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
PSD4Q8NDX1 SNX5-210ENST00000481323 562 ntTSL 3 BASIC17.16■□□□□ 0.34
PSD4Q8NDX1 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
PSD4Q8NDX1 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
PSD4Q8NDX1 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC17.16■□□□□ 0.34
PSD4Q8NDX1 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC17.16■□□□□ 0.34
PSD4Q8NDX1 CLN6-204ENST00000564752 900 ntTSL 3 BASIC17.16■□□□□ 0.34
PSD4Q8NDX1 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
PSD4Q8NDX1 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC17.16■□□□□ 0.34
PSD4Q8NDX1 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC17.16■□□□□ 0.34
PSD4Q8NDX1 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC17.16■□□□□ 0.34
PSD4Q8NDX1 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
PSD4Q8NDX1 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PSD4Q8NDX1 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
PSD4Q8NDX1 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
PSD4Q8NDX1 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PSD4Q8NDX1 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
PSD4Q8NDX1 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PSD4Q8NDX1 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC17.16■□□□□ 0.34
PSD4Q8NDX1 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PSD4Q8NDX1 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PSD4Q8NDX1 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PSD4Q8NDX1 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC17.15■□□□□ 0.34
PSD4Q8NDX1 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
PSD4Q8NDX1 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
PSD4Q8NDX1 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC17.15■□□□□ 0.34
PSD4Q8NDX1 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
PSD4Q8NDX1 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms