Protein–RNA interactions for Protein: Q8NDH2

CCDC168, Coiled-coil domain-containing protein 168, humanhuman

Predictions only

Length 2,452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC168Q8NDH2 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC15.13■□□□□ 0.01
CCDC168Q8NDH2 ACTG1P14-201ENST00000446382 1122 ntBASIC15.13■□□□□ 0.01
CCDC168Q8NDH2 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC15.13■□□□□ 0.01
CCDC168Q8NDH2 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC15.13■□□□□ 0.01
CCDC168Q8NDH2 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CCDC168Q8NDH2 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC15.13■□□□□ 0.01
CCDC168Q8NDH2 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC15.13■□□□□ 0.01
CCDC168Q8NDH2 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
CCDC168Q8NDH2 SIGLEC16-201ENST00000599858 1437 ntBASIC15.13■□□□□ 0.01
CCDC168Q8NDH2 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CCDC168Q8NDH2 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
CCDC168Q8NDH2 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CCDC168Q8NDH2 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
CCDC168Q8NDH2 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
CCDC168Q8NDH2 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC15.12■□□□□ 0.01
CCDC168Q8NDH2 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CCDC168Q8NDH2 AC069262.1-201ENST00000539058 672 ntBASIC15.12■□□□□ 0.01
CCDC168Q8NDH2 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
CCDC168Q8NDH2 AC073592.4-201ENST00000623827 446 ntBASIC15.12■□□□□ 0.01
CCDC168Q8NDH2 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC15.12■□□□□ 0.01
CCDC168Q8NDH2 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
CCDC168Q8NDH2 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
CCDC168Q8NDH2 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CCDC168Q8NDH2 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
CCDC168Q8NDH2 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
CCDC168Q8NDH2 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
CCDC168Q8NDH2 IRX1P1-201ENST00000438849 1838 ntBASIC15.12■□□□□ 0.01
CCDC168Q8NDH2 LBX2-AS1-202ENST00000603175 2083 ntBASIC15.12■□□□□ 0.01
CCDC168Q8NDH2 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CCDC168Q8NDH2 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC15.12■□□□□ 0.01
CCDC168Q8NDH2 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
CCDC168Q8NDH2 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC15.12■□□□□ 0.01
CCDC168Q8NDH2 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC15.12■□□□□ 0.01
CCDC168Q8NDH2 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC15.12■□□□□ 0.01
CCDC168Q8NDH2 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC15.12■□□□□ 0.01
CCDC168Q8NDH2 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CCDC168Q8NDH2 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CCDC168Q8NDH2 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC15.12■□□□□ 0.01
CCDC168Q8NDH2 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CCDC168Q8NDH2 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CCDC168Q8NDH2 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC15.12■□□□□ 0.01
CCDC168Q8NDH2 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CCDC168Q8NDH2 AC099778.1-201ENST00000568593 1911 ntBASIC15.12■□□□□ 0.01
CCDC168Q8NDH2 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CCDC168Q8NDH2 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CCDC168Q8NDH2 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
CCDC168Q8NDH2 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC15.11■□□□□ 0.01
CCDC168Q8NDH2 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC15.11■□□□□ 0.01
CCDC168Q8NDH2 DAD1-205ENST00000543337 501 ntTSL 3 BASIC15.11■□□□□ 0.01
CCDC168Q8NDH2 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
CCDC168Q8NDH2 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC15.11■□□□□ 0.01
CCDC168Q8NDH2 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CCDC168Q8NDH2 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CCDC168Q8NDH2 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CCDC168Q8NDH2 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CCDC168Q8NDH2 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC15.11■□□□□ 0.01
CCDC168Q8NDH2 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CCDC168Q8NDH2 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
CCDC168Q8NDH2 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
CCDC168Q8NDH2 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
CCDC168Q8NDH2 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
CCDC168Q8NDH2 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
CCDC168Q8NDH2 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CCDC168Q8NDH2 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CCDC168Q8NDH2 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CCDC168Q8NDH2 EDF1-203ENST00000371649 790 ntTSL 2 BASIC15.11■□□□□ 0.01
CCDC168Q8NDH2 AP002414.1-201ENST00000391405 1147 ntBASIC15.11■□□□□ 0.01
CCDC168Q8NDH2 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CCDC168Q8NDH2 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC15.11■□□□□ 0.01
CCDC168Q8NDH2 AC055876.3-201ENST00000431496 288 ntBASIC15.11■□□□□ 0.01
CCDC168Q8NDH2 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC15.11■□□□□ 0.01
CCDC168Q8NDH2 NMU-203ENST00000507338 658 ntTSL 3 BASIC15.11■□□□□ 0.01
CCDC168Q8NDH2 AC109322.1-201ENST00000524499 1264 ntBASIC15.11■□□□□ 0.01
CCDC168Q8NDH2 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC15.11■□□□□ 0.01
CCDC168Q8NDH2 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC15.11■□□□□ 0.01
CCDC168Q8NDH2 DUT-210ENST00000559935 569 ntTSL 3 BASIC15.11■□□□□ 0.01
CCDC168Q8NDH2 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC15.11■□□□□ 0.01
CCDC168Q8NDH2 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC15.11■□□□□ 0.01
CCDC168Q8NDH2 AC138649.4-201ENST00000612222 287 ntBASIC15.11■□□□□ 0.01
CCDC168Q8NDH2 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CCDC168Q8NDH2 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CCDC168Q8NDH2 AC006504.4-201ENST00000592118 1568 ntBASIC15.11■□□□□ 0.01
CCDC168Q8NDH2 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC15.11■□□□□ 0.01
CCDC168Q8NDH2 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC15.11■□□□□ 0.01
CCDC168Q8NDH2 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
CCDC168Q8NDH2 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
CCDC168Q8NDH2 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CCDC168Q8NDH2 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC15.11■□□□□ 0.01
CCDC168Q8NDH2 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
CCDC168Q8NDH2 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC15.11■□□□□ 0.01
CCDC168Q8NDH2 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CCDC168Q8NDH2 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CCDC168Q8NDH2 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CCDC168Q8NDH2 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
CCDC168Q8NDH2 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
CCDC168Q8NDH2 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CCDC168Q8NDH2 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CCDC168Q8NDH2 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CCDC168Q8NDH2 HLA-DRB6-201ENST00000411500 1235 ntBASIC15.1■□□□□ 0.01
CCDC168Q8NDH2 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC15.1■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms