Protein–RNA interactions for Protein: Q8NCQ3

LINC00301, Putative uncharacterized protein encoded by LINC00301, humanhuman

Predictions only

Length 95 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00301Q8NCQ3 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
LINC00301Q8NCQ3 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
LINC00301Q8NCQ3 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC20.69■□□□□ 0.9
LINC00301Q8NCQ3 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
LINC00301Q8NCQ3 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
LINC00301Q8NCQ3 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
LINC00301Q8NCQ3 HMGA1P5-201ENST00000412453 271 ntBASIC20.69■□□□□ 0.9
LINC00301Q8NCQ3 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC20.69■□□□□ 0.9
LINC00301Q8NCQ3 NEK4P2-201ENST00000580004 1012 ntBASIC20.69■□□□□ 0.9
LINC00301Q8NCQ3 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
LINC00301Q8NCQ3 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC20.69■□□□□ 0.9
LINC00301Q8NCQ3 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
LINC00301Q8NCQ3 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
LINC00301Q8NCQ3 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
LINC00301Q8NCQ3 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC20.69■□□□□ 0.9
LINC00301Q8NCQ3 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
LINC00301Q8NCQ3 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
LINC00301Q8NCQ3 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC20.68■□□□□ 0.9
LINC00301Q8NCQ3 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC20.68■□□□□ 0.9
LINC00301Q8NCQ3 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC20.68■□□□□ 0.9
LINC00301Q8NCQ3 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
LINC00301Q8NCQ3 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC20.68■□□□□ 0.9
LINC00301Q8NCQ3 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
LINC00301Q8NCQ3 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
LINC00301Q8NCQ3 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
LINC00301Q8NCQ3 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
LINC00301Q8NCQ3 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC20.68■□□□□ 0.9
LINC00301Q8NCQ3 Telomerase-vert.1-201ENST00000363312 438 ntBASIC20.68■□□□□ 0.9
LINC00301Q8NCQ3 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
LINC00301Q8NCQ3 GAD2-202ENST00000376248 680 ntTSL 5 BASIC20.68■□□□□ 0.9
LINC00301Q8NCQ3 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC20.68■□□□□ 0.9
LINC00301Q8NCQ3 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC20.68■□□□□ 0.9
LINC00301Q8NCQ3 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC20.68■□□□□ 0.9
LINC00301Q8NCQ3 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC20.68■□□□□ 0.9
LINC00301Q8NCQ3 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC20.68■□□□□ 0.9
LINC00301Q8NCQ3 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC20.68■□□□□ 0.9
LINC00301Q8NCQ3 MIR3917-201ENST00000580971 93 ntBASIC20.68■□□□□ 0.9
LINC00301Q8NCQ3 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC20.68■□□□□ 0.9
LINC00301Q8NCQ3 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
LINC00301Q8NCQ3 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
LINC00301Q8NCQ3 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC20.68■□□□□ 0.9
LINC00301Q8NCQ3 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
LINC00301Q8NCQ3 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
LINC00301Q8NCQ3 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC20.68■□□□□ 0.9
LINC00301Q8NCQ3 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC20.68■□□□□ 0.9
LINC00301Q8NCQ3 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
LINC00301Q8NCQ3 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
LINC00301Q8NCQ3 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC20.68■□□□□ 0.9
LINC00301Q8NCQ3 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC20.68■□□□□ 0.9
LINC00301Q8NCQ3 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC20.68■□□□□ 0.9
LINC00301Q8NCQ3 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
LINC00301Q8NCQ3 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
LINC00301Q8NCQ3 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
LINC00301Q8NCQ3 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC20.67■□□□□ 0.9
LINC00301Q8NCQ3 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC20.67■□□□□ 0.9
LINC00301Q8NCQ3 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
LINC00301Q8NCQ3 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
LINC00301Q8NCQ3 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
LINC00301Q8NCQ3 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
LINC00301Q8NCQ3 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
LINC00301Q8NCQ3 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
LINC00301Q8NCQ3 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
LINC00301Q8NCQ3 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC20.67■□□□□ 0.9
LINC00301Q8NCQ3 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC20.67■□□□□ 0.9
LINC00301Q8NCQ3 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC20.67■□□□□ 0.9
LINC00301Q8NCQ3 DET1-205ENST00000558413 583 ntTSL 4 BASIC20.67■□□□□ 0.9
LINC00301Q8NCQ3 AL512604.3-201ENST00000569583 964 ntBASIC20.67■□□□□ 0.9
LINC00301Q8NCQ3 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC20.67■□□□□ 0.9
LINC00301Q8NCQ3 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
LINC00301Q8NCQ3 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC20.67■□□□□ 0.9
LINC00301Q8NCQ3 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
LINC00301Q8NCQ3 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
LINC00301Q8NCQ3 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
LINC00301Q8NCQ3 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
LINC00301Q8NCQ3 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
LINC00301Q8NCQ3 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
LINC00301Q8NCQ3 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC20.67■□□□□ 0.9
LINC00301Q8NCQ3 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC20.67■□□□□ 0.9
LINC00301Q8NCQ3 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
LINC00301Q8NCQ3 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
LINC00301Q8NCQ3 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
LINC00301Q8NCQ3 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
LINC00301Q8NCQ3 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
LINC00301Q8NCQ3 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
LINC00301Q8NCQ3 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
LINC00301Q8NCQ3 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
LINC00301Q8NCQ3 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC20.66■□□□□ 0.9
LINC00301Q8NCQ3 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC20.66■□□□□ 0.9
LINC00301Q8NCQ3 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC20.66■□□□□ 0.9
LINC00301Q8NCQ3 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC20.66■□□□□ 0.9
LINC00301Q8NCQ3 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC20.66■□□□□ 0.9
LINC00301Q8NCQ3 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
LINC00301Q8NCQ3 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
LINC00301Q8NCQ3 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
LINC00301Q8NCQ3 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC20.66■□□□□ 0.9
LINC00301Q8NCQ3 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
LINC00301Q8NCQ3 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
LINC00301Q8NCQ3 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC20.66■□□□□ 0.9
LINC00301Q8NCQ3 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC20.66■□□□□ 0.9
LINC00301Q8NCQ3 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms