Protein–RNA interactions for Protein: Q8N5R6

CCDC33, Coiled-coil domain-containing protein 33, humanhuman

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33Q8N5R6 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CCDC33Q8N5R6 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC19.09■□□□□ 0.65
CCDC33Q8N5R6 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CCDC33Q8N5R6 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC19.08■□□□□ 0.65
CCDC33Q8N5R6 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
CCDC33Q8N5R6 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
CCDC33Q8N5R6 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
CCDC33Q8N5R6 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
CCDC33Q8N5R6 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
CCDC33Q8N5R6 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CCDC33Q8N5R6 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
CCDC33Q8N5R6 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC19.08■□□□□ 0.64
CCDC33Q8N5R6 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
CCDC33Q8N5R6 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC19.08■□□□□ 0.64
CCDC33Q8N5R6 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
CCDC33Q8N5R6 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC19.08■□□□□ 0.64
CCDC33Q8N5R6 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
CCDC33Q8N5R6 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC19.08■□□□□ 0.64
CCDC33Q8N5R6 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC19.08■□□□□ 0.64
CCDC33Q8N5R6 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC19.08■□□□□ 0.64
CCDC33Q8N5R6 AC011498.5-201ENST00000592027 486 ntBASIC19.08■□□□□ 0.64
CCDC33Q8N5R6 AC092329.2-201ENST00000598402 547 ntBASIC19.08■□□□□ 0.64
CCDC33Q8N5R6 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC19.08■□□□□ 0.64
CCDC33Q8N5R6 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
CCDC33Q8N5R6 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
CCDC33Q8N5R6 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC19.08■□□□□ 0.64
CCDC33Q8N5R6 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC19.08■□□□□ 0.64
CCDC33Q8N5R6 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CCDC33Q8N5R6 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CCDC33Q8N5R6 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
CCDC33Q8N5R6 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
CCDC33Q8N5R6 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CCDC33Q8N5R6 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
CCDC33Q8N5R6 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CCDC33Q8N5R6 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC19.08■□□□□ 0.64
CCDC33Q8N5R6 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
CCDC33Q8N5R6 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
CCDC33Q8N5R6 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CCDC33Q8N5R6 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CCDC33Q8N5R6 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
CCDC33Q8N5R6 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CCDC33Q8N5R6 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CCDC33Q8N5R6 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC19.07■□□□□ 0.64
CCDC33Q8N5R6 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CCDC33Q8N5R6 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CCDC33Q8N5R6 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CCDC33Q8N5R6 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CCDC33Q8N5R6 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CCDC33Q8N5R6 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.64
CCDC33Q8N5R6 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC19.07■□□□□ 0.64
CCDC33Q8N5R6 GRAMD4P1-201ENST00000435181 1110 ntBASIC19.07■□□□□ 0.64
CCDC33Q8N5R6 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CCDC33Q8N5R6 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
CCDC33Q8N5R6 MIR3652-201ENST00000579335 131 ntBASIC19.07■□□□□ 0.64
CCDC33Q8N5R6 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CCDC33Q8N5R6 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC19.07■□□□□ 0.64
CCDC33Q8N5R6 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC19.07■□□□□ 0.64
CCDC33Q8N5R6 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CCDC33Q8N5R6 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
CCDC33Q8N5R6 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC19.07■□□□□ 0.64
CCDC33Q8N5R6 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CCDC33Q8N5R6 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC19.07■□□□□ 0.64
CCDC33Q8N5R6 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CCDC33Q8N5R6 AC073592.3-201ENST00000625118 1834 ntBASIC19.07■□□□□ 0.64
CCDC33Q8N5R6 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CCDC33Q8N5R6 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
CCDC33Q8N5R6 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
CCDC33Q8N5R6 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
CCDC33Q8N5R6 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CCDC33Q8N5R6 MYLKP1-201ENST00000509077 1580 ntBASIC19.06■□□□□ 0.64
CCDC33Q8N5R6 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
CCDC33Q8N5R6 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CCDC33Q8N5R6 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC19.06■□□□□ 0.64
CCDC33Q8N5R6 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC19.06■□□□□ 0.64
CCDC33Q8N5R6 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC19.06■□□□□ 0.64
CCDC33Q8N5R6 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
CCDC33Q8N5R6 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CCDC33Q8N5R6 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC19.06■□□□□ 0.64
CCDC33Q8N5R6 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC19.06■□□□□ 0.64
CCDC33Q8N5R6 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC19.06■□□□□ 0.64
CCDC33Q8N5R6 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CCDC33Q8N5R6 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC19.06■□□□□ 0.64
CCDC33Q8N5R6 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC19.06■□□□□ 0.64
CCDC33Q8N5R6 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC19.06■□□□□ 0.64
CCDC33Q8N5R6 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
CCDC33Q8N5R6 FZD10-202ENST00000539839 3282 ntBASIC19.06■□□□□ 0.64
CCDC33Q8N5R6 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CCDC33Q8N5R6 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CCDC33Q8N5R6 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CCDC33Q8N5R6 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CCDC33Q8N5R6 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CCDC33Q8N5R6 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CCDC33Q8N5R6 TSSC2-201ENST00000450217 709 ntBASIC19.06■□□□□ 0.64
CCDC33Q8N5R6 BX276092.5-203ENST00000456199 560 ntBASIC19.06■□□□□ 0.64
CCDC33Q8N5R6 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC19.06■□□□□ 0.64
CCDC33Q8N5R6 SEC1P-202ENST00000473944 940 ntBASIC19.06■□□□□ 0.64
CCDC33Q8N5R6 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
CCDC33Q8N5R6 AL157888.1-201ENST00000631930 593 ntBASIC19.06■□□□□ 0.64
CCDC33Q8N5R6 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
CCDC33Q8N5R6 KRT8P50-201ENST00000562022 1438 ntBASIC19.06■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms