Protein–RNA interactions for Protein: Q8IZC6

COL27A1, Collagen alpha-1(XXVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1Q8IZC6 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
COL27A1Q8IZC6 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
COL27A1Q8IZC6 SOD2-201ENST00000337404 991 ntTSL 2 BASIC17.04■□□□□ 0.32
COL27A1Q8IZC6 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
COL27A1Q8IZC6 ELK2BP-201ENST00000415014 1224 ntBASIC17.04■□□□□ 0.32
COL27A1Q8IZC6 CRCP-205ENST00000431089 942 ntTSL 2 BASIC17.04■□□□□ 0.32
COL27A1Q8IZC6 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC17.04■□□□□ 0.32
COL27A1Q8IZC6 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC17.04■□□□□ 0.32
COL27A1Q8IZC6 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC17.04■□□□□ 0.32
COL27A1Q8IZC6 AC108751.1-201ENST00000490852 363 ntBASIC17.04■□□□□ 0.32
COL27A1Q8IZC6 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC17.04■□□□□ 0.32
COL27A1Q8IZC6 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
COL27A1Q8IZC6 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
COL27A1Q8IZC6 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
COL27A1Q8IZC6 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
COL27A1Q8IZC6 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
COL27A1Q8IZC6 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
COL27A1Q8IZC6 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC17.04■□□□□ 0.32
COL27A1Q8IZC6 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
COL27A1Q8IZC6 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
COL27A1Q8IZC6 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC17.03■□□□□ 0.32
COL27A1Q8IZC6 KLF4P1-201ENST00000412782 1185 ntBASIC17.03■□□□□ 0.32
COL27A1Q8IZC6 AC004967.1-201ENST00000453589 447 ntBASIC17.03■□□□□ 0.32
COL27A1Q8IZC6 AC002347.1-201ENST00000569543 541 ntBASIC17.03■□□□□ 0.32
COL27A1Q8IZC6 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC17.03■□□□□ 0.32
COL27A1Q8IZC6 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
COL27A1Q8IZC6 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC17.03■□□□□ 0.32
COL27A1Q8IZC6 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
COL27A1Q8IZC6 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC17.03■□□□□ 0.32
COL27A1Q8IZC6 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
COL27A1Q8IZC6 ADM-207ENST00000530439 1839 ntTSL 2 BASIC17.03■□□□□ 0.32
COL27A1Q8IZC6 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC17.03■□□□□ 0.32
COL27A1Q8IZC6 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC17.03■□□□□ 0.32
COL27A1Q8IZC6 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
COL27A1Q8IZC6 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
COL27A1Q8IZC6 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
COL27A1Q8IZC6 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
COL27A1Q8IZC6 AC023274.1-201ENST00000418278 595 ntBASIC17.03■□□□□ 0.32
COL27A1Q8IZC6 AC122714.2-201ENST00000502787 707 ntBASIC17.03■□□□□ 0.32
COL27A1Q8IZC6 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
COL27A1Q8IZC6 RNA5SP416-201ENST00000516838 111 ntBASIC17.03■□□□□ 0.32
COL27A1Q8IZC6 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
COL27A1Q8IZC6 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC17.03■□□□□ 0.32
COL27A1Q8IZC6 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
COL27A1Q8IZC6 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
COL27A1Q8IZC6 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
COL27A1Q8IZC6 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
COL27A1Q8IZC6 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
COL27A1Q8IZC6 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
COL27A1Q8IZC6 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC17.02■□□□□ 0.32
COL27A1Q8IZC6 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC17.02■□□□□ 0.32
COL27A1Q8IZC6 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC17.02■□□□□ 0.32
COL27A1Q8IZC6 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC17.02■□□□□ 0.32
COL27A1Q8IZC6 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
COL27A1Q8IZC6 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
COL27A1Q8IZC6 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
COL27A1Q8IZC6 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC17.02■□□□□ 0.32
COL27A1Q8IZC6 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
COL27A1Q8IZC6 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC17.02■□□□□ 0.32
COL27A1Q8IZC6 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC17.02■□□□□ 0.32
COL27A1Q8IZC6 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC17.02■□□□□ 0.32
COL27A1Q8IZC6 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC17.02■□□□□ 0.32
COL27A1Q8IZC6 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
COL27A1Q8IZC6 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.31
COL27A1Q8IZC6 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
COL27A1Q8IZC6 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
COL27A1Q8IZC6 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
COL27A1Q8IZC6 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
COL27A1Q8IZC6 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
COL27A1Q8IZC6 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC17.02■□□□□ 0.31
COL27A1Q8IZC6 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.31
COL27A1Q8IZC6 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
COL27A1Q8IZC6 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
COL27A1Q8IZC6 AC112482.1-201ENST00000492080 688 ntBASIC17.01■□□□□ 0.31
COL27A1Q8IZC6 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC17.01■□□□□ 0.31
COL27A1Q8IZC6 AL355385.1-201ENST00000606123 409 ntBASIC17.01■□□□□ 0.31
COL27A1Q8IZC6 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
COL27A1Q8IZC6 AC002310.6-201ENST00000624451 1377 ntBASIC17.01■□□□□ 0.31
COL27A1Q8IZC6 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC17.01■□□□□ 0.31
COL27A1Q8IZC6 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
COL27A1Q8IZC6 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC17.01■□□□□ 0.31
COL27A1Q8IZC6 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
COL27A1Q8IZC6 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
COL27A1Q8IZC6 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
COL27A1Q8IZC6 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC17.01■□□□□ 0.31
COL27A1Q8IZC6 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
COL27A1Q8IZC6 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC17.01■□□□□ 0.31
COL27A1Q8IZC6 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC17.01■□□□□ 0.31
COL27A1Q8IZC6 RPS8P6-201ENST00000426177 609 ntBASIC17.01■□□□□ 0.31
COL27A1Q8IZC6 AP006288.1-201ENST00000446065 395 ntBASIC17.01■□□□□ 0.31
COL27A1Q8IZC6 AC108073.2-201ENST00000464002 357 ntBASIC17.01■□□□□ 0.31
COL27A1Q8IZC6 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC17.01■□□□□ 0.31
COL27A1Q8IZC6 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
COL27A1Q8IZC6 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC17.01■□□□□ 0.31
COL27A1Q8IZC6 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC17.01■□□□□ 0.31
COL27A1Q8IZC6 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
COL27A1Q8IZC6 AC134684.3-201ENST00000641758 218 ntBASIC17.01■□□□□ 0.31
COL27A1Q8IZC6 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
COL27A1Q8IZC6 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
COL27A1Q8IZC6 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms