Protein–RNA interactions for Protein: Q8IYJ1

CPNE9, Copine-9, humanhuman

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE9Q8IYJ1 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CPNE9Q8IYJ1 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CPNE9Q8IYJ1 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
CPNE9Q8IYJ1 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
CPNE9Q8IYJ1 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
CPNE9Q8IYJ1 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC18.01■□□□□ 0.47
CPNE9Q8IYJ1 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CPNE9Q8IYJ1 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CPNE9Q8IYJ1 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC18.01■□□□□ 0.47
CPNE9Q8IYJ1 CD70-202ENST00000423145 881 ntTSL 2 BASIC18.01■□□□□ 0.47
CPNE9Q8IYJ1 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CPNE9Q8IYJ1 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CPNE9Q8IYJ1 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
CPNE9Q8IYJ1 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC18.01■□□□□ 0.47
CPNE9Q8IYJ1 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CPNE9Q8IYJ1 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CPNE9Q8IYJ1 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CPNE9Q8IYJ1 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
CPNE9Q8IYJ1 HTR7P1-202ENST00000624664 4411 ntBASIC18.01■□□□□ 0.47
CPNE9Q8IYJ1 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CPNE9Q8IYJ1 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CPNE9Q8IYJ1 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CPNE9Q8IYJ1 BCL2-203ENST00000589955 5011 ntBASIC18■□□□□ 0.47
CPNE9Q8IYJ1 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC18■□□□□ 0.47
CPNE9Q8IYJ1 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC18■□□□□ 0.47
CPNE9Q8IYJ1 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC18■□□□□ 0.47
CPNE9Q8IYJ1 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC18■□□□□ 0.47
CPNE9Q8IYJ1 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC18■□□□□ 0.47
CPNE9Q8IYJ1 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC18■□□□□ 0.47
CPNE9Q8IYJ1 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC18■□□□□ 0.47
CPNE9Q8IYJ1 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CPNE9Q8IYJ1 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC18■□□□□ 0.47
CPNE9Q8IYJ1 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC18■□□□□ 0.47
CPNE9Q8IYJ1 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
CPNE9Q8IYJ1 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC18■□□□□ 0.47
CPNE9Q8IYJ1 AC012306.2-201ENST00000609350 630 ntBASIC18■□□□□ 0.47
CPNE9Q8IYJ1 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC18■□□□□ 0.47
CPNE9Q8IYJ1 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CPNE9Q8IYJ1 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CPNE9Q8IYJ1 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC18■□□□□ 0.47
CPNE9Q8IYJ1 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CPNE9Q8IYJ1 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC18■□□□□ 0.47
CPNE9Q8IYJ1 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC18■□□□□ 0.47
CPNE9Q8IYJ1 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CPNE9Q8IYJ1 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
CPNE9Q8IYJ1 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
CPNE9Q8IYJ1 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC18■□□□□ 0.47
CPNE9Q8IYJ1 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC17.99■□□□□ 0.47
CPNE9Q8IYJ1 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CPNE9Q8IYJ1 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
CPNE9Q8IYJ1 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC17.99■□□□□ 0.47
CPNE9Q8IYJ1 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CPNE9Q8IYJ1 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC17.99■□□□□ 0.47
CPNE9Q8IYJ1 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CPNE9Q8IYJ1 AL024508.2-201ENST00000607749 1894 ntBASIC17.99■□□□□ 0.47
CPNE9Q8IYJ1 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CPNE9Q8IYJ1 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC17.99■□□□□ 0.47
CPNE9Q8IYJ1 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CPNE9Q8IYJ1 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CPNE9Q8IYJ1 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CPNE9Q8IYJ1 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CPNE9Q8IYJ1 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CPNE9Q8IYJ1 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC17.99■□□□□ 0.47
CPNE9Q8IYJ1 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
CPNE9Q8IYJ1 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
CPNE9Q8IYJ1 AP000523.1-201ENST00000398242 1049 ntBASIC17.99■□□□□ 0.47
CPNE9Q8IYJ1 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
CPNE9Q8IYJ1 LIN28AP1-201ENST00000429574 405 ntBASIC17.99■□□□□ 0.47
CPNE9Q8IYJ1 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
CPNE9Q8IYJ1 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
CPNE9Q8IYJ1 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC17.99■□□□□ 0.47
CPNE9Q8IYJ1 MIR3917-201ENST00000580971 93 ntBASIC17.99■□□□□ 0.47
CPNE9Q8IYJ1 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC17.99■□□□□ 0.47
CPNE9Q8IYJ1 AL023973.1-201ENST00000624619 620 ntBASIC17.99■□□□□ 0.47
CPNE9Q8IYJ1 AC092865.7-201ENST00000641832 219 ntBASIC17.99■□□□□ 0.47
CPNE9Q8IYJ1 NOC2LP2-201ENST00000407594 1944 ntBASIC17.99■□□□□ 0.47
CPNE9Q8IYJ1 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC17.99■□□□□ 0.47
CPNE9Q8IYJ1 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
CPNE9Q8IYJ1 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC17.99■□□□□ 0.47
CPNE9Q8IYJ1 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CPNE9Q8IYJ1 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC17.99■□□□□ 0.47
CPNE9Q8IYJ1 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CPNE9Q8IYJ1 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CPNE9Q8IYJ1 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CPNE9Q8IYJ1 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC17.99■□□□□ 0.47
CPNE9Q8IYJ1 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CPNE9Q8IYJ1 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CPNE9Q8IYJ1 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CPNE9Q8IYJ1 AC138028.4-201ENST00000564984 1845 ntBASIC17.98■□□□□ 0.47
CPNE9Q8IYJ1 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
CPNE9Q8IYJ1 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CPNE9Q8IYJ1 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CPNE9Q8IYJ1 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC17.98■□□□□ 0.47
CPNE9Q8IYJ1 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC17.98■□□□□ 0.47
CPNE9Q8IYJ1 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC17.98■□□□□ 0.47
CPNE9Q8IYJ1 ATP5G1P1-201ENST00000448724 379 ntBASIC17.98■□□□□ 0.47
CPNE9Q8IYJ1 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC17.98■□□□□ 0.47
CPNE9Q8IYJ1 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC17.98■□□□□ 0.47
CPNE9Q8IYJ1 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC17.98■□□□□ 0.47
CPNE9Q8IYJ1 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 58.9 ms