Protein–RNA interactions for Protein: Q8IWZ5

TRIM42, Tripartite motif-containing protein 42, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM42Q8IWZ5 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC18.17■□□□□ 0.5
TRIM42Q8IWZ5 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC18.17■□□□□ 0.5
TRIM42Q8IWZ5 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRIM42Q8IWZ5 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC18.17■□□□□ 0.5
TRIM42Q8IWZ5 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
TRIM42Q8IWZ5 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC18.17■□□□□ 0.5
TRIM42Q8IWZ5 NME9-203ENST00000383180 2133 ntTSL 2 BASIC18.17■□□□□ 0.5
TRIM42Q8IWZ5 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC18.17■□□□□ 0.5
TRIM42Q8IWZ5 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC18.17■□□□□ 0.5
TRIM42Q8IWZ5 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC18.17■□□□□ 0.5
TRIM42Q8IWZ5 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRIM42Q8IWZ5 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRIM42Q8IWZ5 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
TRIM42Q8IWZ5 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC18.16■□□□□ 0.5
TRIM42Q8IWZ5 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC18.16■□□□□ 0.5
TRIM42Q8IWZ5 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC18.16■□□□□ 0.5
TRIM42Q8IWZ5 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRIM42Q8IWZ5 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRIM42Q8IWZ5 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC18.16■□□□□ 0.5
TRIM42Q8IWZ5 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRIM42Q8IWZ5 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
TRIM42Q8IWZ5 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
TRIM42Q8IWZ5 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
TRIM42Q8IWZ5 PRORSD1P-201ENST00000295112 541 ntBASIC18.16■□□□□ 0.5
TRIM42Q8IWZ5 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC18.16■□□□□ 0.5
TRIM42Q8IWZ5 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
TRIM42Q8IWZ5 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRIM42Q8IWZ5 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC18.16■□□□□ 0.5
TRIM42Q8IWZ5 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
TRIM42Q8IWZ5 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
TRIM42Q8IWZ5 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC18.16■□□□□ 0.5
TRIM42Q8IWZ5 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC18.16■□□□□ 0.5
TRIM42Q8IWZ5 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC18.16■□□□□ 0.5
TRIM42Q8IWZ5 AC073648.6-201ENST00000641589 218 ntBASIC18.16■□□□□ 0.5
TRIM42Q8IWZ5 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRIM42Q8IWZ5 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
TRIM42Q8IWZ5 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRIM42Q8IWZ5 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
TRIM42Q8IWZ5 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRIM42Q8IWZ5 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC18.16■□□□□ 0.5
TRIM42Q8IWZ5 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC18.16■□□□□ 0.5
TRIM42Q8IWZ5 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRIM42Q8IWZ5 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC18.16■□□□□ 0.5
TRIM42Q8IWZ5 AL023806.1-201ENST00000603994 1649 ntBASIC18.16■□□□□ 0.5
TRIM42Q8IWZ5 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRIM42Q8IWZ5 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
TRIM42Q8IWZ5 AC108860.2-201ENST00000562760 2183 ntBASIC18.15■□□□□ 0.5
TRIM42Q8IWZ5 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRIM42Q8IWZ5 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
TRIM42Q8IWZ5 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRIM42Q8IWZ5 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
TRIM42Q8IWZ5 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRIM42Q8IWZ5 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
TRIM42Q8IWZ5 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRIM42Q8IWZ5 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRIM42Q8IWZ5 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRIM42Q8IWZ5 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC18.15■□□□□ 0.5
TRIM42Q8IWZ5 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
TRIM42Q8IWZ5 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC18.15■□□□□ 0.5
TRIM42Q8IWZ5 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRIM42Q8IWZ5 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC18.15■□□□□ 0.5
TRIM42Q8IWZ5 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
TRIM42Q8IWZ5 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRIM42Q8IWZ5 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
TRIM42Q8IWZ5 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC18.15■□□□□ 0.5
TRIM42Q8IWZ5 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRIM42Q8IWZ5 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
TRIM42Q8IWZ5 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRIM42Q8IWZ5 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
TRIM42Q8IWZ5 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
TRIM42Q8IWZ5 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRIM42Q8IWZ5 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRIM42Q8IWZ5 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC18.15■□□□□ 0.5
TRIM42Q8IWZ5 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRIM42Q8IWZ5 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRIM42Q8IWZ5 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRIM42Q8IWZ5 HARS-201ENST00000307633 1780 ntTSL 2 BASIC18.14■□□□□ 0.5
TRIM42Q8IWZ5 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
TRIM42Q8IWZ5 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.5
TRIM42Q8IWZ5 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.5
TRIM42Q8IWZ5 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.5
TRIM42Q8IWZ5 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.5
TRIM42Q8IWZ5 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
TRIM42Q8IWZ5 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC18.14■□□□□ 0.49
TRIM42Q8IWZ5 KRT18P55-202ENST00000578578 1546 ntBASIC18.14■□□□□ 0.49
TRIM42Q8IWZ5 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC18.14■□□□□ 0.49
TRIM42Q8IWZ5 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
TRIM42Q8IWZ5 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC18.14■□□□□ 0.49
TRIM42Q8IWZ5 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC18.14■□□□□ 0.49
TRIM42Q8IWZ5 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TRIM42Q8IWZ5 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
TRIM42Q8IWZ5 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
TRIM42Q8IWZ5 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
TRIM42Q8IWZ5 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC18.14■□□□□ 0.49
TRIM42Q8IWZ5 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TRIM42Q8IWZ5 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
TRIM42Q8IWZ5 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TRIM42Q8IWZ5 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC18.14■□□□□ 0.49
TRIM42Q8IWZ5 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC18.14■□□□□ 0.49
TRIM42Q8IWZ5 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC18.14■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms