Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 AC099343.3-201ENST00000605834 2503 ntBASIC17.86■□□□□ 0.45
TRIM48Q8IWZ4 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TRIM48Q8IWZ4 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC17.85■□□□□ 0.45
TRIM48Q8IWZ4 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
TRIM48Q8IWZ4 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TRIM48Q8IWZ4 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC17.85■□□□□ 0.45
TRIM48Q8IWZ4 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TRIM48Q8IWZ4 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TRIM48Q8IWZ4 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TRIM48Q8IWZ4 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
TRIM48Q8IWZ4 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC17.85■□□□□ 0.45
TRIM48Q8IWZ4 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
TRIM48Q8IWZ4 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
TRIM48Q8IWZ4 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
TRIM48Q8IWZ4 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC17.85■□□□□ 0.45
TRIM48Q8IWZ4 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
TRIM48Q8IWZ4 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC17.85■□□□□ 0.45
TRIM48Q8IWZ4 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC17.85■□□□□ 0.45
TRIM48Q8IWZ4 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC17.85■□□□□ 0.45
TRIM48Q8IWZ4 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
TRIM48Q8IWZ4 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
TRIM48Q8IWZ4 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
TRIM48Q8IWZ4 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TRIM48Q8IWZ4 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC17.85■□□□□ 0.45
TRIM48Q8IWZ4 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
TRIM48Q8IWZ4 AL499627.1-201ENST00000569373 2188 ntBASIC17.85■□□□□ 0.45
TRIM48Q8IWZ4 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
TRIM48Q8IWZ4 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TRIM48Q8IWZ4 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
TRIM48Q8IWZ4 AC008687.5-201ENST00000593746 558 ntBASIC17.85■□□□□ 0.45
TRIM48Q8IWZ4 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
TRIM48Q8IWZ4 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC17.85■□□□□ 0.45
TRIM48Q8IWZ4 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TRIM48Q8IWZ4 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC17.84■□□□□ 0.45
TRIM48Q8IWZ4 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
TRIM48Q8IWZ4 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC17.84■□□□□ 0.45
TRIM48Q8IWZ4 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
TRIM48Q8IWZ4 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
TRIM48Q8IWZ4 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRIM48Q8IWZ4 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
TRIM48Q8IWZ4 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
TRIM48Q8IWZ4 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
TRIM48Q8IWZ4 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC17.84■□□□□ 0.45
TRIM48Q8IWZ4 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
TRIM48Q8IWZ4 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRIM48Q8IWZ4 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRIM48Q8IWZ4 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC17.84■□□□□ 0.45
TRIM48Q8IWZ4 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
TRIM48Q8IWZ4 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
TRIM48Q8IWZ4 UBC-206ENST00000538617 1303 ntTSL 5 BASIC17.84■□□□□ 0.45
TRIM48Q8IWZ4 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRIM48Q8IWZ4 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRIM48Q8IWZ4 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRIM48Q8IWZ4 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRIM48Q8IWZ4 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRIM48Q8IWZ4 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC17.84■□□□□ 0.45
TRIM48Q8IWZ4 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRIM48Q8IWZ4 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC17.84■□□□□ 0.45
TRIM48Q8IWZ4 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC17.84■□□□□ 0.45
TRIM48Q8IWZ4 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC17.84■□□□□ 0.45
TRIM48Q8IWZ4 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC17.84■□□□□ 0.45
TRIM48Q8IWZ4 RNF126P1-202ENST00000569893 925 ntBASIC17.84■□□□□ 0.45
TRIM48Q8IWZ4 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC17.84■□□□□ 0.45
TRIM48Q8IWZ4 AC005332.3-201ENST00000589904 676 ntBASIC17.84■□□□□ 0.45
TRIM48Q8IWZ4 GPR32P1-201ENST00000601788 811 ntBASIC17.84■□□□□ 0.45
TRIM48Q8IWZ4 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC17.84■□□□□ 0.45
TRIM48Q8IWZ4 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC17.84■□□□□ 0.45
TRIM48Q8IWZ4 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
TRIM48Q8IWZ4 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC17.84■□□□□ 0.45
TRIM48Q8IWZ4 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
TRIM48Q8IWZ4 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRIM48Q8IWZ4 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRIM48Q8IWZ4 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRIM48Q8IWZ4 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRIM48Q8IWZ4 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRIM48Q8IWZ4 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRIM48Q8IWZ4 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRIM48Q8IWZ4 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRIM48Q8IWZ4 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.45
TRIM48Q8IWZ4 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
TRIM48Q8IWZ4 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC17.83■□□□□ 0.45
TRIM48Q8IWZ4 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
TRIM48Q8IWZ4 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
TRIM48Q8IWZ4 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
TRIM48Q8IWZ4 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC17.83■□□□□ 0.45
TRIM48Q8IWZ4 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC17.83■□□□□ 0.45
TRIM48Q8IWZ4 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
TRIM48Q8IWZ4 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
TRIM48Q8IWZ4 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC17.83■□□□□ 0.44
TRIM48Q8IWZ4 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
TRIM48Q8IWZ4 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
TRIM48Q8IWZ4 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
TRIM48Q8IWZ4 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
TRIM48Q8IWZ4 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
TRIM48Q8IWZ4 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
TRIM48Q8IWZ4 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC17.83■□□□□ 0.44
TRIM48Q8IWZ4 ATP5G2P1-201ENST00000433580 426 ntBASIC17.83■□□□□ 0.44
TRIM48Q8IWZ4 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC17.83■□□□□ 0.44
TRIM48Q8IWZ4 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC17.83■□□□□ 0.44
TRIM48Q8IWZ4 TEN1-204ENST00000588202 862 ntTSL 3 BASIC17.83■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms