Protein–RNA interactions for Protein: Q8IVM7

LINC00346, Putative uncharacterized protein encoded by LINC00346, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346Q8IVM7 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
LINC00346Q8IVM7 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
LINC00346Q8IVM7 ECEL1P2-202ENST00000465689 757 ntBASIC16.12■□□□□ 0.17
LINC00346Q8IVM7 AC128688.1-201ENST00000487626 519 ntBASIC16.12■□□□□ 0.17
LINC00346Q8IVM7 AC093827.2-201ENST00000512654 315 ntBASIC16.12■□□□□ 0.17
LINC00346Q8IVM7 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
LINC00346Q8IVM7 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
LINC00346Q8IVM7 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
LINC00346Q8IVM7 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
LINC00346Q8IVM7 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
LINC00346Q8IVM7 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
LINC00346Q8IVM7 STK4-201ENST00000372801 2038 ntTSL 2 BASIC16.12■□□□□ 0.17
LINC00346Q8IVM7 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
LINC00346Q8IVM7 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC16.12■□□□□ 0.17
LINC00346Q8IVM7 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
LINC00346Q8IVM7 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
LINC00346Q8IVM7 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
LINC00346Q8IVM7 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
LINC00346Q8IVM7 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
LINC00346Q8IVM7 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
LINC00346Q8IVM7 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
LINC00346Q8IVM7 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
LINC00346Q8IVM7 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC16.12■□□□□ 0.17
LINC00346Q8IVM7 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
LINC00346Q8IVM7 AC134043.2-201ENST00000624206 2238 ntBASIC16.11■□□□□ 0.17
LINC00346Q8IVM7 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
LINC00346Q8IVM7 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
LINC00346Q8IVM7 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
LINC00346Q8IVM7 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
LINC00346Q8IVM7 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
LINC00346Q8IVM7 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
LINC00346Q8IVM7 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
LINC00346Q8IVM7 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC16.11■□□□□ 0.17
LINC00346Q8IVM7 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
LINC00346Q8IVM7 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
LINC00346Q8IVM7 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
LINC00346Q8IVM7 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC16.11■□□□□ 0.17
LINC00346Q8IVM7 AL596275.1-201ENST00000423464 877 ntBASIC16.11■□□□□ 0.17
LINC00346Q8IVM7 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC16.11■□□□□ 0.17
LINC00346Q8IVM7 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC16.11■□□□□ 0.17
LINC00346Q8IVM7 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC16.11■□□□□ 0.17
LINC00346Q8IVM7 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC16.11■□□□□ 0.17
LINC00346Q8IVM7 AC104390.1-201ENST00000555663 520 ntBASIC16.11■□□□□ 0.17
LINC00346Q8IVM7 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
LINC00346Q8IVM7 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC16.11■□□□□ 0.17
LINC00346Q8IVM7 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
LINC00346Q8IVM7 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
LINC00346Q8IVM7 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
LINC00346Q8IVM7 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC16.11■□□□□ 0.17
LINC00346Q8IVM7 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
LINC00346Q8IVM7 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
LINC00346Q8IVM7 AP000997.3-201ENST00000623333 2250 ntBASIC16.11■□□□□ 0.17
LINC00346Q8IVM7 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
LINC00346Q8IVM7 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
LINC00346Q8IVM7 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
LINC00346Q8IVM7 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
LINC00346Q8IVM7 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LINC00346Q8IVM7 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LINC00346Q8IVM7 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC16.1■□□□□ 0.17
LINC00346Q8IVM7 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LINC00346Q8IVM7 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC16.1■□□□□ 0.17
LINC00346Q8IVM7 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC16.1■□□□□ 0.17
LINC00346Q8IVM7 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC16.1■□□□□ 0.17
LINC00346Q8IVM7 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
LINC00346Q8IVM7 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
LINC00346Q8IVM7 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
LINC00346Q8IVM7 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
LINC00346Q8IVM7 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC16.1■□□□□ 0.17
LINC00346Q8IVM7 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
LINC00346Q8IVM7 LINC01126-201ENST00000623515 1646 ntBASIC16.1■□□□□ 0.17
LINC00346Q8IVM7 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC16.1■□□□□ 0.17
LINC00346Q8IVM7 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
LINC00346Q8IVM7 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
LINC00346Q8IVM7 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
LINC00346Q8IVM7 AC009947.2-201ENST00000444014 672 ntBASIC16.1■□□□□ 0.17
LINC00346Q8IVM7 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC16.1■□□□□ 0.17
LINC00346Q8IVM7 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC16.1■□□□□ 0.17
LINC00346Q8IVM7 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC16.1■□□□□ 0.17
LINC00346Q8IVM7 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC16.1■□□□□ 0.17
LINC00346Q8IVM7 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC16.1■□□□□ 0.17
LINC00346Q8IVM7 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
LINC00346Q8IVM7 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
LINC00346Q8IVM7 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LINC00346Q8IVM7 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
LINC00346Q8IVM7 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LINC00346Q8IVM7 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
LINC00346Q8IVM7 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
LINC00346Q8IVM7 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC16.1■□□□□ 0.17
LINC00346Q8IVM7 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
LINC00346Q8IVM7 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
LINC00346Q8IVM7 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
LINC00346Q8IVM7 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LINC00346Q8IVM7 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LINC00346Q8IVM7 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC16.09■□□□□ 0.17
LINC00346Q8IVM7 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
LINC00346Q8IVM7 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC16.09■□□□□ 0.17
LINC00346Q8IVM7 FLJ13224-201ENST00000313737 1514 ntBASIC16.09■□□□□ 0.17
LINC00346Q8IVM7 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
LINC00346Q8IVM7 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
LINC00346Q8IVM7 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms