Protein–RNA interactions for Protein: Q86XT4

TRIM50, E3 ubiquitin-protein ligase TRIM50, humanhuman

Predictions only

Length 487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50Q86XT4 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
TRIM50Q86XT4 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC20.24■□□□□ 0.83
TRIM50Q86XT4 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC20.24■□□□□ 0.83
TRIM50Q86XT4 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
TRIM50Q86XT4 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC20.24■□□□□ 0.83
TRIM50Q86XT4 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TRIM50Q86XT4 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TRIM50Q86XT4 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TRIM50Q86XT4 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
TRIM50Q86XT4 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
TRIM50Q86XT4 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
TRIM50Q86XT4 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
TRIM50Q86XT4 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC20.24■□□□□ 0.83
TRIM50Q86XT4 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC20.24■□□□□ 0.83
TRIM50Q86XT4 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC20.24■□□□□ 0.83
TRIM50Q86XT4 AL121912.1-201ENST00000603683 238 ntBASIC20.24■□□□□ 0.83
TRIM50Q86XT4 REXO1L6P-202ENST00000619970 1078 ntBASIC20.24■□□□□ 0.83
TRIM50Q86XT4 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
TRIM50Q86XT4 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TRIM50Q86XT4 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC20.24■□□□□ 0.83
TRIM50Q86XT4 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
TRIM50Q86XT4 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
TRIM50Q86XT4 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
TRIM50Q86XT4 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TRIM50Q86XT4 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
TRIM50Q86XT4 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TRIM50Q86XT4 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TRIM50Q86XT4 HCG11-201ENST00000411553 5696 ntBASIC20.24■□□□□ 0.83
TRIM50Q86XT4 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC20.24■□□□□ 0.83
TRIM50Q86XT4 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC20.24■□□□□ 0.83
TRIM50Q86XT4 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC20.24■□□□□ 0.83
TRIM50Q86XT4 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TRIM50Q86XT4 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC20.23■□□□□ 0.83
TRIM50Q86XT4 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TRIM50Q86XT4 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TRIM50Q86XT4 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC20.23■□□□□ 0.83
TRIM50Q86XT4 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC20.23■□□□□ 0.83
TRIM50Q86XT4 MRPL3P1-201ENST00000400109 1033 ntBASIC20.23■□□□□ 0.83
TRIM50Q86XT4 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC20.23■□□□□ 0.83
TRIM50Q86XT4 AF238378.1-201ENST00000526806 358 ntBASIC20.23■□□□□ 0.83
TRIM50Q86XT4 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
TRIM50Q86XT4 SLC25A6P4-201ENST00000586535 553 ntBASIC20.23■□□□□ 0.83
TRIM50Q86XT4 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
TRIM50Q86XT4 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC20.23■□□□□ 0.83
TRIM50Q86XT4 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC20.23■□□□□ 0.83
TRIM50Q86XT4 ANKRD20A8P-203ENST00000641373 517 ntBASIC20.23■□□□□ 0.83
TRIM50Q86XT4 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TRIM50Q86XT4 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
TRIM50Q86XT4 AL031598.1-201ENST00000561511 1773 ntBASIC20.23■□□□□ 0.83
TRIM50Q86XT4 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TRIM50Q86XT4 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
TRIM50Q86XT4 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TRIM50Q86XT4 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TRIM50Q86XT4 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TRIM50Q86XT4 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
TRIM50Q86XT4 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
TRIM50Q86XT4 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
TRIM50Q86XT4 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TRIM50Q86XT4 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC20.22■□□□□ 0.83
TRIM50Q86XT4 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
TRIM50Q86XT4 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TRIM50Q86XT4 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC20.22■□□□□ 0.83
TRIM50Q86XT4 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TRIM50Q86XT4 SAPCD2P3-201ENST00000455031 850 ntBASIC20.22■□□□□ 0.83
TRIM50Q86XT4 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC20.22■□□□□ 0.83
TRIM50Q86XT4 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC20.22■□□□□ 0.83
TRIM50Q86XT4 TP73-AS1-207ENST00000624167 988 ntBASIC20.22■□□□□ 0.83
TRIM50Q86XT4 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TRIM50Q86XT4 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC20.22■□□□□ 0.83
TRIM50Q86XT4 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TRIM50Q86XT4 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TRIM50Q86XT4 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
TRIM50Q86XT4 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
TRIM50Q86XT4 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
TRIM50Q86XT4 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TRIM50Q86XT4 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TRIM50Q86XT4 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
TRIM50Q86XT4 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
TRIM50Q86XT4 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC20.21■□□□□ 0.83
TRIM50Q86XT4 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
TRIM50Q86XT4 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
TRIM50Q86XT4 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
TRIM50Q86XT4 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC20.21■□□□□ 0.83
TRIM50Q86XT4 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC20.21■□□□□ 0.83
TRIM50Q86XT4 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TRIM50Q86XT4 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TRIM50Q86XT4 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC20.21■□□□□ 0.83
TRIM50Q86XT4 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC20.21■□□□□ 0.83
TRIM50Q86XT4 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TRIM50Q86XT4 CALM3-211ENST00000598871 561 ntTSL 4 BASIC20.21■□□□□ 0.83
TRIM50Q86XT4 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
TRIM50Q86XT4 AC114341.1-201ENST00000618070 349 ntBASIC20.21■□□□□ 0.83
TRIM50Q86XT4 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
TRIM50Q86XT4 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
TRIM50Q86XT4 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC20.21■□□□□ 0.83
TRIM50Q86XT4 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TRIM50Q86XT4 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TRIM50Q86XT4 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
TRIM50Q86XT4 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
TRIM50Q86XT4 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 68.1 ms