Protein–RNA interactions for Protein: Q86VP3

PACS2, Phosphofurin acidic cluster sorting protein 2, humanhuman

Predictions only

Length 889 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PACS2Q86VP3 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
PACS2Q86VP3 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PACS2Q86VP3 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PACS2Q86VP3 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PACS2Q86VP3 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
PACS2Q86VP3 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PACS2Q86VP3 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC18.32■□□□□ 0.52
PACS2Q86VP3 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PACS2Q86VP3 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PACS2Q86VP3 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
PACS2Q86VP3 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
PACS2Q86VP3 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC18.32■□□□□ 0.52
PACS2Q86VP3 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PACS2Q86VP3 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PACS2Q86VP3 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PACS2Q86VP3 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
PACS2Q86VP3 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PACS2Q86VP3 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PACS2Q86VP3 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC18.32■□□□□ 0.52
PACS2Q86VP3 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PACS2Q86VP3 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC18.32■□□□□ 0.52
PACS2Q86VP3 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PACS2Q86VP3 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PACS2Q86VP3 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PACS2Q86VP3 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
PACS2Q86VP3 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
PACS2Q86VP3 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PACS2Q86VP3 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PACS2Q86VP3 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PACS2Q86VP3 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PACS2Q86VP3 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC18.31■□□□□ 0.52
PACS2Q86VP3 POM121L13P-201ENST00000422362 380 ntBASIC18.31■□□□□ 0.52
PACS2Q86VP3 AC128676.1-201ENST00000454392 318 ntBASIC18.31■□□□□ 0.52
PACS2Q86VP3 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
PACS2Q86VP3 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
PACS2Q86VP3 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC18.31■□□□□ 0.52
PACS2Q86VP3 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC18.31■□□□□ 0.52
PACS2Q86VP3 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC18.31■□□□□ 0.52
PACS2Q86VP3 AC120498.8-201ENST00000614275 531 ntBASIC18.31■□□□□ 0.52
PACS2Q86VP3 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
PACS2Q86VP3 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
PACS2Q86VP3 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PACS2Q86VP3 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PACS2Q86VP3 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PACS2Q86VP3 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC18.31■□□□□ 0.52
PACS2Q86VP3 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
PACS2Q86VP3 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PACS2Q86VP3 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC18.31■□□□□ 0.52
PACS2Q86VP3 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC18.31■□□□□ 0.52
PACS2Q86VP3 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC18.31■□□□□ 0.52
PACS2Q86VP3 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC18.31■□□□□ 0.52
PACS2Q86VP3 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PACS2Q86VP3 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC18.31■□□□□ 0.52
PACS2Q86VP3 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
PACS2Q86VP3 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
PACS2Q86VP3 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
PACS2Q86VP3 MYB-201ENST00000316528 3571 ntTSL 5 BASIC18.31■□□□□ 0.52
PACS2Q86VP3 MYB-241ENST00000616088 3573 ntTSL 5 BASIC18.31■□□□□ 0.52
PACS2Q86VP3 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PACS2Q86VP3 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PACS2Q86VP3 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
PACS2Q86VP3 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC18.3■□□□□ 0.52
PACS2Q86VP3 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC18.3■□□□□ 0.52
PACS2Q86VP3 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC18.3■□□□□ 0.52
PACS2Q86VP3 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PACS2Q86VP3 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
PACS2Q86VP3 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
PACS2Q86VP3 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PACS2Q86VP3 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PACS2Q86VP3 AGGF1P2-201ENST00000426656 2106 ntBASIC18.3■□□□□ 0.52
PACS2Q86VP3 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC18.3■□□□□ 0.52
PACS2Q86VP3 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC18.3■□□□□ 0.52
PACS2Q86VP3 AL031963.3-201ENST00000606441 850 ntBASIC18.3■□□□□ 0.52
PACS2Q86VP3 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC18.3■□□□□ 0.52
PACS2Q86VP3 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
PACS2Q86VP3 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
PACS2Q86VP3 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PACS2Q86VP3 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
PACS2Q86VP3 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PACS2Q86VP3 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PACS2Q86VP3 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PACS2Q86VP3 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PACS2Q86VP3 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PACS2Q86VP3 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PACS2Q86VP3 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PACS2Q86VP3 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
PACS2Q86VP3 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
PACS2Q86VP3 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PACS2Q86VP3 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PACS2Q86VP3 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
PACS2Q86VP3 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC18.29■□□□□ 0.52
PACS2Q86VP3 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PACS2Q86VP3 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
PACS2Q86VP3 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PACS2Q86VP3 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
PACS2Q86VP3 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
PACS2Q86VP3 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC18.29■□□□□ 0.52
PACS2Q86VP3 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PACS2Q86VP3 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
PACS2Q86VP3 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC18.29■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms