Protein–RNA interactions for Protein: Q7Z4H3

HDDC2, HD domain-containing protein 2, humanhuman

Predictions only

Length 204 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2Q7Z4H3 AL353719.1-201ENST00000566847 864 ntBASIC16.58■□□□□ 0.24
HDDC2Q7Z4H3 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
HDDC2Q7Z4H3 AP000525.1-201ENST00000608286 694 ntBASIC16.58■□□□□ 0.24
HDDC2Q7Z4H3 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
HDDC2Q7Z4H3 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC16.58■□□□□ 0.24
HDDC2Q7Z4H3 AL162741.1-201ENST00000565563 1558 ntBASIC16.58■□□□□ 0.24
HDDC2Q7Z4H3 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
HDDC2Q7Z4H3 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
HDDC2Q7Z4H3 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
HDDC2Q7Z4H3 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC16.58■□□□□ 0.24
HDDC2Q7Z4H3 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC16.58■□□□□ 0.24
HDDC2Q7Z4H3 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
HDDC2Q7Z4H3 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
HDDC2Q7Z4H3 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
HDDC2Q7Z4H3 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
HDDC2Q7Z4H3 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
HDDC2Q7Z4H3 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
HDDC2Q7Z4H3 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
HDDC2Q7Z4H3 TNRC18P3-201ENST00000441896 2691 ntBASIC16.58■□□□□ 0.24
HDDC2Q7Z4H3 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
HDDC2Q7Z4H3 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
HDDC2Q7Z4H3 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
HDDC2Q7Z4H3 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC16.57■□□□□ 0.24
HDDC2Q7Z4H3 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
HDDC2Q7Z4H3 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC16.57■□□□□ 0.24
HDDC2Q7Z4H3 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
HDDC2Q7Z4H3 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
HDDC2Q7Z4H3 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC16.57■□□□□ 0.24
HDDC2Q7Z4H3 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC16.57■□□□□ 0.24
HDDC2Q7Z4H3 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
HDDC2Q7Z4H3 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC16.57■□□□□ 0.24
HDDC2Q7Z4H3 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
HDDC2Q7Z4H3 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC16.57■□□□□ 0.24
HDDC2Q7Z4H3 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
HDDC2Q7Z4H3 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
HDDC2Q7Z4H3 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
HDDC2Q7Z4H3 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
HDDC2Q7Z4H3 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
HDDC2Q7Z4H3 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC16.57■□□□□ 0.24
HDDC2Q7Z4H3 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
HDDC2Q7Z4H3 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
HDDC2Q7Z4H3 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC16.57■□□□□ 0.24
HDDC2Q7Z4H3 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
HDDC2Q7Z4H3 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC16.57■□□□□ 0.24
HDDC2Q7Z4H3 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC16.57■□□□□ 0.24
HDDC2Q7Z4H3 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC16.57■□□□□ 0.24
HDDC2Q7Z4H3 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
HDDC2Q7Z4H3 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
HDDC2Q7Z4H3 CFL2-205ENST00000555765 632 ntTSL 2 BASIC16.57■□□□□ 0.24
HDDC2Q7Z4H3 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
HDDC2Q7Z4H3 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
HDDC2Q7Z4H3 AC010653.2-201ENST00000623505 997 ntBASIC16.57■□□□□ 0.24
HDDC2Q7Z4H3 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC16.57■□□□□ 0.24
HDDC2Q7Z4H3 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
HDDC2Q7Z4H3 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC16.57■□□□□ 0.24
HDDC2Q7Z4H3 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
HDDC2Q7Z4H3 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
HDDC2Q7Z4H3 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC16.57■□□□□ 0.24
HDDC2Q7Z4H3 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
HDDC2Q7Z4H3 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
HDDC2Q7Z4H3 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
HDDC2Q7Z4H3 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
HDDC2Q7Z4H3 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
HDDC2Q7Z4H3 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
HDDC2Q7Z4H3 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC16.56■□□□□ 0.24
HDDC2Q7Z4H3 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC16.56■□□□□ 0.24
HDDC2Q7Z4H3 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
HDDC2Q7Z4H3 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
HDDC2Q7Z4H3 MYLKP1-201ENST00000509077 1580 ntBASIC16.56■□□□□ 0.24
HDDC2Q7Z4H3 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
HDDC2Q7Z4H3 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
HDDC2Q7Z4H3 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
HDDC2Q7Z4H3 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
HDDC2Q7Z4H3 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC16.56■□□□□ 0.24
HDDC2Q7Z4H3 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
HDDC2Q7Z4H3 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
HDDC2Q7Z4H3 MIR1238-201ENST00000408483 83 ntBASIC16.56■□□□□ 0.24
HDDC2Q7Z4H3 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC16.56■□□□□ 0.24
HDDC2Q7Z4H3 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
HDDC2Q7Z4H3 AL512604.3-201ENST00000569583 964 ntBASIC16.56■□□□□ 0.24
HDDC2Q7Z4H3 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC16.56■□□□□ 0.24
HDDC2Q7Z4H3 AL023803.3-201ENST00000615559 522 ntBASIC16.56■□□□□ 0.24
HDDC2Q7Z4H3 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
HDDC2Q7Z4H3 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
HDDC2Q7Z4H3 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
HDDC2Q7Z4H3 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
HDDC2Q7Z4H3 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
HDDC2Q7Z4H3 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC16.56■□□□□ 0.24
HDDC2Q7Z4H3 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC16.56■□□□□ 0.24
HDDC2Q7Z4H3 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC16.56■□□□□ 0.24
HDDC2Q7Z4H3 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC16.56■□□□□ 0.24
HDDC2Q7Z4H3 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
HDDC2Q7Z4H3 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
HDDC2Q7Z4H3 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
HDDC2Q7Z4H3 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
HDDC2Q7Z4H3 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
HDDC2Q7Z4H3 AC068880.1-201ENST00000507289 2297 ntBASIC16.56■□□□□ 0.24
HDDC2Q7Z4H3 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC16.55■□□□□ 0.24
HDDC2Q7Z4H3 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HDDC2Q7Z4H3 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms