Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SHFQ7M4L6 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC16.46■□□□□ 0.23
SHFQ7M4L6 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC16.46■□□□□ 0.23
SHFQ7M4L6 AL135905.2-201ENST00000584934 1404 ntBASIC16.46■□□□□ 0.23
SHFQ7M4L6 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC16.46■□□□□ 0.23
SHFQ7M4L6 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
SHFQ7M4L6 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
SHFQ7M4L6 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SHFQ7M4L6 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SHFQ7M4L6 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SHFQ7M4L6 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SHFQ7M4L6 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
SHFQ7M4L6 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SHFQ7M4L6 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
SHFQ7M4L6 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC16.46■□□□□ 0.23
SHFQ7M4L6 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
SHFQ7M4L6 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SHFQ7M4L6 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SHFQ7M4L6 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
SHFQ7M4L6 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC16.46■□□□□ 0.23
SHFQ7M4L6 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
SHFQ7M4L6 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC16.46■□□□□ 0.23
SHFQ7M4L6 AC008040.2-201ENST00000461049 708 ntBASIC16.46■□□□□ 0.23
SHFQ7M4L6 B3GAT3P1-201ENST00000471720 806 ntBASIC16.46■□□□□ 0.23
SHFQ7M4L6 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
SHFQ7M4L6 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC16.46■□□□□ 0.23
SHFQ7M4L6 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC16.46■□□□□ 0.23
SHFQ7M4L6 CFL2-205ENST00000555765 632 ntTSL 2 BASIC16.46■□□□□ 0.23
SHFQ7M4L6 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC16.46■□□□□ 0.23
SHFQ7M4L6 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC16.46■□□□□ 0.23
SHFQ7M4L6 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
SHFQ7M4L6 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
SHFQ7M4L6 FAM197Y4-202ENST00000622692 608 ntBASIC16.46■□□□□ 0.23
SHFQ7M4L6 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC16.46■□□□□ 0.23
SHFQ7M4L6 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
SHFQ7M4L6 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC16.46■□□□□ 0.23
SHFQ7M4L6 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC16.46■□□□□ 0.23
SHFQ7M4L6 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SHFQ7M4L6 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC16.46■□□□□ 0.23
SHFQ7M4L6 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
SHFQ7M4L6 AL109659.2-201ENST00000606809 1674 ntBASIC16.46■□□□□ 0.23
SHFQ7M4L6 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
SHFQ7M4L6 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
SHFQ7M4L6 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.22
SHFQ7M4L6 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
SHFQ7M4L6 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
SHFQ7M4L6 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC16.45■□□□□ 0.22
SHFQ7M4L6 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
SHFQ7M4L6 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
SHFQ7M4L6 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC16.45■□□□□ 0.22
SHFQ7M4L6 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
SHFQ7M4L6 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SHFQ7M4L6 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC16.45■□□□□ 0.22
SHFQ7M4L6 AC011506.1-201ENST00000474329 610 ntBASIC16.45■□□□□ 0.22
SHFQ7M4L6 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC16.45■□□□□ 0.22
SHFQ7M4L6 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
SHFQ7M4L6 KRT18P41-201ENST00000518924 1277 ntBASIC16.45■□□□□ 0.22
SHFQ7M4L6 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC16.45■□□□□ 0.22
SHFQ7M4L6 TK2-204ENST00000525974 1178 ntTSL 2 BASIC16.45■□□□□ 0.22
SHFQ7M4L6 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC16.45■□□□□ 0.22
SHFQ7M4L6 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC16.45■□□□□ 0.22
SHFQ7M4L6 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC16.45■□□□□ 0.22
SHFQ7M4L6 AP000692.2-201ENST00000608391 879 ntBASIC16.45■□□□□ 0.22
SHFQ7M4L6 GMCL1P1-201ENST00000463439 1581 ntBASIC16.45■□□□□ 0.22
SHFQ7M4L6 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SHFQ7M4L6 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
SHFQ7M4L6 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
SHFQ7M4L6 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
SHFQ7M4L6 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
SHFQ7M4L6 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
SHFQ7M4L6 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
SHFQ7M4L6 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SHFQ7M4L6 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
SHFQ7M4L6 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SHFQ7M4L6 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC16.45■□□□□ 0.22
SHFQ7M4L6 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SHFQ7M4L6 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
SHFQ7M4L6 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
SHFQ7M4L6 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC16.44■□□□□ 0.22
SHFQ7M4L6 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC16.44■□□□□ 0.22
SHFQ7M4L6 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
SHFQ7M4L6 AC141586.5-201ENST00000624546 2050 ntBASIC16.44■□□□□ 0.22
SHFQ7M4L6 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SHFQ7M4L6 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
SHFQ7M4L6 HLA-DQB1-201ENST00000374943 1656 ntBASIC16.44■□□□□ 0.22
SHFQ7M4L6 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
SHFQ7M4L6 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
SHFQ7M4L6 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC16.44■□□□□ 0.22
SHFQ7M4L6 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
SHFQ7M4L6 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC16.44■□□□□ 0.22
SHFQ7M4L6 NME9-203ENST00000383180 2133 ntTSL 2 BASIC16.44■□□□□ 0.22
SHFQ7M4L6 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC16.44■□□□□ 0.22
SHFQ7M4L6 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
SHFQ7M4L6 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC16.44■□□□□ 0.22
SHFQ7M4L6 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC16.44■□□□□ 0.22
SHFQ7M4L6 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC16.44■□□□□ 0.22
SHFQ7M4L6 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC16.44■□□□□ 0.22
SHFQ7M4L6 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC16.44■□□□□ 0.22
SHFQ7M4L6 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC16.44■□□□□ 0.22
SHFQ7M4L6 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 17.7 ms