Protein–RNA interactions for Protein: Q6VVB1

NHLRC1, E3 ubiquitin-protein ligase NHLRC1, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC1Q6VVB1 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
NHLRC1Q6VVB1 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
NHLRC1Q6VVB1 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
NHLRC1Q6VVB1 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
NHLRC1Q6VVB1 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
NHLRC1Q6VVB1 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
NHLRC1Q6VVB1 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
NHLRC1Q6VVB1 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
NHLRC1Q6VVB1 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
NHLRC1Q6VVB1 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
NHLRC1Q6VVB1 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
NHLRC1Q6VVB1 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
NHLRC1Q6VVB1 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
NHLRC1Q6VVB1 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
NHLRC1Q6VVB1 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
NHLRC1Q6VVB1 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
NHLRC1Q6VVB1 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
NHLRC1Q6VVB1 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
NHLRC1Q6VVB1 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
NHLRC1Q6VVB1 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC16.34■□□□□ 0.21
NHLRC1Q6VVB1 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC16.34■□□□□ 0.21
NHLRC1Q6VVB1 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
NHLRC1Q6VVB1 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC16.34■□□□□ 0.21
NHLRC1Q6VVB1 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
NHLRC1Q6VVB1 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC16.34■□□□□ 0.21
NHLRC1Q6VVB1 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC16.34■□□□□ 0.21
NHLRC1Q6VVB1 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC16.34■□□□□ 0.21
NHLRC1Q6VVB1 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC16.34■□□□□ 0.21
NHLRC1Q6VVB1 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
NHLRC1Q6VVB1 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC16.34■□□□□ 0.21
NHLRC1Q6VVB1 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC16.34■□□□□ 0.21
NHLRC1Q6VVB1 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
NHLRC1Q6VVB1 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
NHLRC1Q6VVB1 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
NHLRC1Q6VVB1 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC16.34■□□□□ 0.21
NHLRC1Q6VVB1 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
NHLRC1Q6VVB1 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
NHLRC1Q6VVB1 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC16.34■□□□□ 0.21
NHLRC1Q6VVB1 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
NHLRC1Q6VVB1 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
NHLRC1Q6VVB1 GMCL1P1-201ENST00000463439 1581 ntBASIC16.34■□□□□ 0.21
NHLRC1Q6VVB1 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
NHLRC1Q6VVB1 CD276-203ENST00000537340 2439 ntTSL 2 BASIC16.34■□□□□ 0.21
NHLRC1Q6VVB1 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
NHLRC1Q6VVB1 AC090340.1-201ENST00000620778 4980 ntBASIC16.34■□□□□ 0.21
NHLRC1Q6VVB1 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
NHLRC1Q6VVB1 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
NHLRC1Q6VVB1 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
NHLRC1Q6VVB1 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.21
NHLRC1Q6VVB1 PHGDH-209ENST00000641074 1780 ntBASIC16.33■□□□□ 0.21
NHLRC1Q6VVB1 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
NHLRC1Q6VVB1 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC16.33■□□□□ 0.21
NHLRC1Q6VVB1 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC16.33■□□□□ 0.2
NHLRC1Q6VVB1 AC005521.1-201ENST00000393351 872 ntBASIC16.33■□□□□ 0.2
NHLRC1Q6VVB1 AP000523.1-201ENST00000398242 1049 ntBASIC16.33■□□□□ 0.2
NHLRC1Q6VVB1 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC16.33■□□□□ 0.2
NHLRC1Q6VVB1 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC16.33■□□□□ 0.2
NHLRC1Q6VVB1 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC16.33■□□□□ 0.2
NHLRC1Q6VVB1 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC16.33■□□□□ 0.2
NHLRC1Q6VVB1 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
NHLRC1Q6VVB1 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC16.33■□□□□ 0.2
NHLRC1Q6VVB1 REEP1-209ENST00000541910 969 ntTSL 2 BASIC16.33■□□□□ 0.2
NHLRC1Q6VVB1 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC16.33■□□□□ 0.2
NHLRC1Q6VVB1 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC16.33■□□□□ 0.2
NHLRC1Q6VVB1 CD276-201ENST00000318424 2738 ntTSL 5 BASIC16.33■□□□□ 0.2
NHLRC1Q6VVB1 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC16.33■□□□□ 0.2
NHLRC1Q6VVB1 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC16.33■□□□□ 0.2
NHLRC1Q6VVB1 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
NHLRC1Q6VVB1 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC16.33■□□□□ 0.2
NHLRC1Q6VVB1 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
NHLRC1Q6VVB1 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
NHLRC1Q6VVB1 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
NHLRC1Q6VVB1 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
NHLRC1Q6VVB1 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
NHLRC1Q6VVB1 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
NHLRC1Q6VVB1 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
NHLRC1Q6VVB1 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
NHLRC1Q6VVB1 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC16.33■□□□□ 0.2
NHLRC1Q6VVB1 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
NHLRC1Q6VVB1 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
NHLRC1Q6VVB1 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC16.32■□□□□ 0.2
NHLRC1Q6VVB1 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
NHLRC1Q6VVB1 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
NHLRC1Q6VVB1 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
NHLRC1Q6VVB1 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
NHLRC1Q6VVB1 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC16.32■□□□□ 0.2
NHLRC1Q6VVB1 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
NHLRC1Q6VVB1 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
NHLRC1Q6VVB1 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC16.32■□□□□ 0.2
NHLRC1Q6VVB1 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
NHLRC1Q6VVB1 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC16.32■□□□□ 0.2
NHLRC1Q6VVB1 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
NHLRC1Q6VVB1 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC16.32■□□□□ 0.2
NHLRC1Q6VVB1 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC16.32■□□□□ 0.2
NHLRC1Q6VVB1 AL441883.1-201ENST00000566170 1045 ntBASIC16.32■□□□□ 0.2
NHLRC1Q6VVB1 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
NHLRC1Q6VVB1 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC16.32■□□□□ 0.2
NHLRC1Q6VVB1 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC16.32■□□□□ 0.2
NHLRC1Q6VVB1 AC011558.1-201ENST00000623459 338 ntBASIC16.32■□□□□ 0.2
NHLRC1Q6VVB1 AL157888.1-201ENST00000631930 593 ntBASIC16.32■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms