Protein–RNA interactions for Protein: Q6NVV3

NIPAL1, Magnesium transporter NIPA3, humanhuman

Predictions only

Length 410 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL1Q6NVV3 MIR3917-201ENST00000580971 93 ntBASIC17.55■□□□□ 0.4
NIPAL1Q6NVV3 RBM42-202ENST00000586618 771 ntTSL 3 BASIC17.55■□□□□ 0.4
NIPAL1Q6NVV3 AC010240.3-201ENST00000607688 395 ntBASIC17.55■□□□□ 0.4
NIPAL1Q6NVV3 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
NIPAL1Q6NVV3 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
NIPAL1Q6NVV3 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
NIPAL1Q6NVV3 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
NIPAL1Q6NVV3 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
NIPAL1Q6NVV3 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
NIPAL1Q6NVV3 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC17.55■□□□□ 0.4
NIPAL1Q6NVV3 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC17.55■□□□□ 0.4
NIPAL1Q6NVV3 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
NIPAL1Q6NVV3 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NIPAL1Q6NVV3 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NIPAL1Q6NVV3 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NIPAL1Q6NVV3 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NIPAL1Q6NVV3 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
NIPAL1Q6NVV3 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
NIPAL1Q6NVV3 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
NIPAL1Q6NVV3 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
NIPAL1Q6NVV3 MYLKP1-201ENST00000509077 1580 ntBASIC17.54■□□□□ 0.4
NIPAL1Q6NVV3 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
NIPAL1Q6NVV3 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
NIPAL1Q6NVV3 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
NIPAL1Q6NVV3 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
NIPAL1Q6NVV3 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
NIPAL1Q6NVV3 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
NIPAL1Q6NVV3 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
NIPAL1Q6NVV3 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
NIPAL1Q6NVV3 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC17.54■□□□□ 0.4
NIPAL1Q6NVV3 AC104076.2-201ENST00000448912 469 ntBASIC17.54■□□□□ 0.4
NIPAL1Q6NVV3 AC022616.7-201ENST00000525383 220 ntBASIC17.54■□□□□ 0.4
NIPAL1Q6NVV3 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
NIPAL1Q6NVV3 AL441883.1-201ENST00000566170 1045 ntBASIC17.54■□□□□ 0.4
NIPAL1Q6NVV3 AC008687.5-201ENST00000593746 558 ntBASIC17.54■□□□□ 0.4
NIPAL1Q6NVV3 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC17.54■□□□□ 0.4
NIPAL1Q6NVV3 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
NIPAL1Q6NVV3 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
NIPAL1Q6NVV3 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
NIPAL1Q6NVV3 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC17.54■□□□□ 0.4
NIPAL1Q6NVV3 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
NIPAL1Q6NVV3 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
NIPAL1Q6NVV3 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC17.54■□□□□ 0.4
NIPAL1Q6NVV3 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC17.54■□□□□ 0.4
NIPAL1Q6NVV3 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
NIPAL1Q6NVV3 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC17.54■□□□□ 0.4
NIPAL1Q6NVV3 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
NIPAL1Q6NVV3 KRT8P50-201ENST00000562022 1438 ntBASIC17.54■□□□□ 0.4
NIPAL1Q6NVV3 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
NIPAL1Q6NVV3 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
NIPAL1Q6NVV3 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC17.54■□□□□ 0.4
NIPAL1Q6NVV3 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC17.54■□□□□ 0.4
NIPAL1Q6NVV3 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
NIPAL1Q6NVV3 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC17.54■□□□□ 0.4
NIPAL1Q6NVV3 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC17.53■□□□□ 0.4
NIPAL1Q6NVV3 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
NIPAL1Q6NVV3 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
NIPAL1Q6NVV3 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
NIPAL1Q6NVV3 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
NIPAL1Q6NVV3 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC17.53■□□□□ 0.4
NIPAL1Q6NVV3 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC17.53■□□□□ 0.4
NIPAL1Q6NVV3 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
NIPAL1Q6NVV3 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC17.53■□□□□ 0.4
NIPAL1Q6NVV3 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
NIPAL1Q6NVV3 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC17.53■□□□□ 0.4
NIPAL1Q6NVV3 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
NIPAL1Q6NVV3 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
NIPAL1Q6NVV3 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC17.53■□□□□ 0.4
NIPAL1Q6NVV3 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
NIPAL1Q6NVV3 NME3-204ENST00000563498 920 ntTSL 2 BASIC17.53■□□□□ 0.4
NIPAL1Q6NVV3 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
NIPAL1Q6NVV3 NAT14-202ENST00000587400 416 ntTSL 5 BASIC17.53■□□□□ 0.4
NIPAL1Q6NVV3 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC17.53■□□□□ 0.4
NIPAL1Q6NVV3 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC17.53■□□□□ 0.4
NIPAL1Q6NVV3 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
NIPAL1Q6NVV3 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
NIPAL1Q6NVV3 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
NIPAL1Q6NVV3 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
NIPAL1Q6NVV3 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
NIPAL1Q6NVV3 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
NIPAL1Q6NVV3 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
NIPAL1Q6NVV3 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
NIPAL1Q6NVV3 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC17.52■□□□□ 0.4
NIPAL1Q6NVV3 USP49-202ENST00000373010 2446 ntTSL 5 BASIC17.52■□□□□ 0.4
NIPAL1Q6NVV3 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
NIPAL1Q6NVV3 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
NIPAL1Q6NVV3 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
NIPAL1Q6NVV3 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
NIPAL1Q6NVV3 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
NIPAL1Q6NVV3 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
NIPAL1Q6NVV3 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
NIPAL1Q6NVV3 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
NIPAL1Q6NVV3 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
NIPAL1Q6NVV3 AC067852.2-201ENST00000590513 2313 ntBASIC17.52■□□□□ 0.4
NIPAL1Q6NVV3 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
NIPAL1Q6NVV3 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
NIPAL1Q6NVV3 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
NIPAL1Q6NVV3 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
NIPAL1Q6NVV3 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
NIPAL1Q6NVV3 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms