Protein–RNA interactions for Protein: Q6NVH7

SWSAP1, ATPase SWSAP1, humanhuman

Predictions only

Length 229 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SWSAP1Q6NVH7 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC20.21■□□□□ 0.83
SWSAP1Q6NVH7 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SWSAP1Q6NVH7 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SWSAP1Q6NVH7 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
SWSAP1Q6NVH7 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
SWSAP1Q6NVH7 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SWSAP1Q6NVH7 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SWSAP1Q6NVH7 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC20.21■□□□□ 0.83
SWSAP1Q6NVH7 PHGDH-209ENST00000641074 1780 ntBASIC20.21■□□□□ 0.83
SWSAP1Q6NVH7 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC20.21■□□□□ 0.83
SWSAP1Q6NVH7 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
SWSAP1Q6NVH7 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC20.2■□□□□ 0.82
SWSAP1Q6NVH7 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
SWSAP1Q6NVH7 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
SWSAP1Q6NVH7 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC20.2■□□□□ 0.82
SWSAP1Q6NVH7 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SWSAP1Q6NVH7 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SWSAP1Q6NVH7 CDV3-207ENST00000508481 661 ntTSL 3 BASIC20.2■□□□□ 0.82
SWSAP1Q6NVH7 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
SWSAP1Q6NVH7 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC20.2■□□□□ 0.82
SWSAP1Q6NVH7 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC20.2■□□□□ 0.82
SWSAP1Q6NVH7 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
SWSAP1Q6NVH7 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SWSAP1Q6NVH7 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SWSAP1Q6NVH7 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SWSAP1Q6NVH7 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
SWSAP1Q6NVH7 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SWSAP1Q6NVH7 AC132938.6-201ENST00000623828 1655 ntBASIC20.19■□□□□ 0.82
SWSAP1Q6NVH7 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
SWSAP1Q6NVH7 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
SWSAP1Q6NVH7 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC20.19■□□□□ 0.82
SWSAP1Q6NVH7 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
SWSAP1Q6NVH7 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
SWSAP1Q6NVH7 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
SWSAP1Q6NVH7 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SWSAP1Q6NVH7 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SWSAP1Q6NVH7 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
SWSAP1Q6NVH7 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
SWSAP1Q6NVH7 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC20.19■□□□□ 0.82
SWSAP1Q6NVH7 KRT18P65-201ENST00000439811 1286 ntBASIC20.19■□□□□ 0.82
SWSAP1Q6NVH7 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC20.19■□□□□ 0.82
SWSAP1Q6NVH7 AC111152.3-201ENST00000569699 673 ntBASIC20.19■□□□□ 0.82
SWSAP1Q6NVH7 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
SWSAP1Q6NVH7 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC20.19■□□□□ 0.82
SWSAP1Q6NVH7 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
SWSAP1Q6NVH7 IFNL4P1-201ENST00000607083 540 ntBASIC20.19■□□□□ 0.82
SWSAP1Q6NVH7 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC20.19■□□□□ 0.82
SWSAP1Q6NVH7 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC20.19■□□□□ 0.82
SWSAP1Q6NVH7 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC20.19■□□□□ 0.82
SWSAP1Q6NVH7 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC20.19■□□□□ 0.82
SWSAP1Q6NVH7 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
SWSAP1Q6NVH7 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
SWSAP1Q6NVH7 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
SWSAP1Q6NVH7 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
SWSAP1Q6NVH7 AL138781.2-201ENST00000617896 1843 ntBASIC20.18■□□□□ 0.82
SWSAP1Q6NVH7 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SWSAP1Q6NVH7 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SWSAP1Q6NVH7 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
SWSAP1Q6NVH7 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
SWSAP1Q6NVH7 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
SWSAP1Q6NVH7 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SWSAP1Q6NVH7 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC20.18■□□□□ 0.82
SWSAP1Q6NVH7 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC20.18■□□□□ 0.82
SWSAP1Q6NVH7 FICD-205ENST00000552758 603 ntTSL 2 BASIC20.18■□□□□ 0.82
SWSAP1Q6NVH7 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
SWSAP1Q6NVH7 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
SWSAP1Q6NVH7 CCNC-219ENST00000627680 896 ntTSL 5 BASIC20.18■□□□□ 0.82
SWSAP1Q6NVH7 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SWSAP1Q6NVH7 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SWSAP1Q6NVH7 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SWSAP1Q6NVH7 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
SWSAP1Q6NVH7 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SWSAP1Q6NVH7 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC20.18■□□□□ 0.82
SWSAP1Q6NVH7 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SWSAP1Q6NVH7 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SWSAP1Q6NVH7 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SWSAP1Q6NVH7 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
SWSAP1Q6NVH7 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SWSAP1Q6NVH7 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
SWSAP1Q6NVH7 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
SWSAP1Q6NVH7 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
SWSAP1Q6NVH7 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
SWSAP1Q6NVH7 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC20.17■□□□□ 0.82
SWSAP1Q6NVH7 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
SWSAP1Q6NVH7 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
SWSAP1Q6NVH7 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
SWSAP1Q6NVH7 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
SWSAP1Q6NVH7 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
SWSAP1Q6NVH7 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
SWSAP1Q6NVH7 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC20.17■□□□□ 0.82
SWSAP1Q6NVH7 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC20.17■□□□□ 0.82
SWSAP1Q6NVH7 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC20.17■□□□□ 0.82
SWSAP1Q6NVH7 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC20.17■□□□□ 0.82
SWSAP1Q6NVH7 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC20.17■□□□□ 0.82
SWSAP1Q6NVH7 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC20.17■□□□□ 0.82
SWSAP1Q6NVH7 AC005336.2-201ENST00000593183 939 ntBASIC20.17■□□□□ 0.82
SWSAP1Q6NVH7 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SWSAP1Q6NVH7 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SWSAP1Q6NVH7 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
SWSAP1Q6NVH7 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 59.2 ms