Protein–RNA interactions for Protein: Q6NUK4

REEP3, Receptor expression-enhancing protein 3, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
REEP3Q6NUK4 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
REEP3Q6NUK4 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
REEP3Q6NUK4 LINC01126-201ENST00000623515 1646 ntBASIC16.97■□□□□ 0.31
REEP3Q6NUK4 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
REEP3Q6NUK4 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
REEP3Q6NUK4 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
REEP3Q6NUK4 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
REEP3Q6NUK4 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
REEP3Q6NUK4 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC16.97■□□□□ 0.31
REEP3Q6NUK4 BAALC-201ENST00000297574 801 ntTSL 3 BASIC16.97■□□□□ 0.31
REEP3Q6NUK4 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC16.97■□□□□ 0.31
REEP3Q6NUK4 KIRREL3-AS3-201ENST00000404882 831 ntBASIC16.97■□□□□ 0.31
REEP3Q6NUK4 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC16.97■□□□□ 0.31
REEP3Q6NUK4 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC16.97■□□□□ 0.31
REEP3Q6NUK4 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC16.97■□□□□ 0.31
REEP3Q6NUK4 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
REEP3Q6NUK4 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC16.97■□□□□ 0.31
REEP3Q6NUK4 MIR4785-201ENST00000585005 73 ntBASIC16.97■□□□□ 0.31
REEP3Q6NUK4 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
REEP3Q6NUK4 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC16.97■□□□□ 0.31
REEP3Q6NUK4 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
REEP3Q6NUK4 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
REEP3Q6NUK4 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
REEP3Q6NUK4 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC16.97■□□□□ 0.31
REEP3Q6NUK4 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
REEP3Q6NUK4 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC16.97■□□□□ 0.31
REEP3Q6NUK4 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
REEP3Q6NUK4 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
REEP3Q6NUK4 KRT18P55-202ENST00000578578 1546 ntBASIC16.96■□□□□ 0.31
REEP3Q6NUK4 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC16.96■□□□□ 0.31
REEP3Q6NUK4 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
REEP3Q6NUK4 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
REEP3Q6NUK4 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
REEP3Q6NUK4 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.31
REEP3Q6NUK4 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.31
REEP3Q6NUK4 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC16.96■□□□□ 0.31
REEP3Q6NUK4 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC16.96■□□□□ 0.31
REEP3Q6NUK4 MIR718-201ENST00000390190 70 ntBASIC16.96■□□□□ 0.31
REEP3Q6NUK4 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
REEP3Q6NUK4 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
REEP3Q6NUK4 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC16.96■□□□□ 0.31
REEP3Q6NUK4 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC16.96■□□□□ 0.31
REEP3Q6NUK4 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
REEP3Q6NUK4 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC16.96■□□□□ 0.31
REEP3Q6NUK4 FITM1-202ENST00000559294 800 ntBASIC16.96■□□□□ 0.31
REEP3Q6NUK4 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
REEP3Q6NUK4 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
REEP3Q6NUK4 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
REEP3Q6NUK4 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC16.96■□□□□ 0.31
REEP3Q6NUK4 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
REEP3Q6NUK4 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
REEP3Q6NUK4 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
REEP3Q6NUK4 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
REEP3Q6NUK4 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
REEP3Q6NUK4 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
REEP3Q6NUK4 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
REEP3Q6NUK4 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
REEP3Q6NUK4 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC16.96■□□□□ 0.31
REEP3Q6NUK4 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC16.96■□□□□ 0.3
REEP3Q6NUK4 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC16.96■□□□□ 0.3
REEP3Q6NUK4 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC16.96■□□□□ 0.3
REEP3Q6NUK4 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
REEP3Q6NUK4 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
REEP3Q6NUK4 AC012317.2-201ENST00000623305 2251 ntBASIC16.95■□□□□ 0.3
REEP3Q6NUK4 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC16.95■□□□□ 0.3
REEP3Q6NUK4 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
REEP3Q6NUK4 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC16.95■□□□□ 0.3
REEP3Q6NUK4 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
REEP3Q6NUK4 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC16.95■□□□□ 0.3
REEP3Q6NUK4 AC006116.8-202ENST00000587620 1550 ntBASIC16.95■□□□□ 0.3
REEP3Q6NUK4 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC16.95■□□□□ 0.3
REEP3Q6NUK4 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
REEP3Q6NUK4 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
REEP3Q6NUK4 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
REEP3Q6NUK4 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
REEP3Q6NUK4 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
REEP3Q6NUK4 AC007663.1-201ENST00000438948 1240 ntBASIC16.95■□□□□ 0.3
REEP3Q6NUK4 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC16.95■□□□□ 0.3
REEP3Q6NUK4 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC16.95■□□□□ 0.3
REEP3Q6NUK4 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
REEP3Q6NUK4 DHDH-203ENST00000522614 776 ntTSL 5 BASIC16.95■□□□□ 0.3
REEP3Q6NUK4 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC16.95■□□□□ 0.3
REEP3Q6NUK4 C2orf69P3-201ENST00000565542 1120 ntBASIC16.95■□□□□ 0.3
REEP3Q6NUK4 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC16.95■□□□□ 0.3
REEP3Q6NUK4 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
REEP3Q6NUK4 AP000525.1-201ENST00000608286 694 ntBASIC16.95■□□□□ 0.3
REEP3Q6NUK4 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC16.95■□□□□ 0.3
REEP3Q6NUK4 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC16.95■□□□□ 0.3
REEP3Q6NUK4 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
REEP3Q6NUK4 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC16.95■□□□□ 0.3
REEP3Q6NUK4 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
REEP3Q6NUK4 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
REEP3Q6NUK4 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
REEP3Q6NUK4 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
REEP3Q6NUK4 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC16.95■□□□□ 0.3
REEP3Q6NUK4 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC16.95■□□□□ 0.3
REEP3Q6NUK4 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
REEP3Q6NUK4 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
REEP3Q6NUK4 NME9-203ENST00000383180 2133 ntTSL 2 BASIC16.94■□□□□ 0.3
REEP3Q6NUK4 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC16.94■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms