Protein–RNA interactions for Protein: Q6IN85

PPP4R3A, Serine/threonine-protein phosphatase 4 regulatory subunit 3A, humanhuman

Predictions only

Length 833 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3AQ6IN85 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
PPP4R3AQ6IN85 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC20.65■□□□□ 0.9
PPP4R3AQ6IN85 TPM1-226ENST00000560959 925 ntTSL 2 BASIC20.65■□□□□ 0.9
PPP4R3AQ6IN85 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC20.65■□□□□ 0.9
PPP4R3AQ6IN85 NAA38-203ENST00000575071 553 ntTSL 2 BASIC20.65■□□□□ 0.9
PPP4R3AQ6IN85 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC20.65■□□□□ 0.9
PPP4R3AQ6IN85 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
PPP4R3AQ6IN85 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC20.65■□□□□ 0.9
PPP4R3AQ6IN85 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
PPP4R3AQ6IN85 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PPP4R3AQ6IN85 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
PPP4R3AQ6IN85 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
PPP4R3AQ6IN85 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PPP4R3AQ6IN85 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.9
PPP4R3AQ6IN85 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC20.64■□□□□ 0.9
PPP4R3AQ6IN85 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC20.64■□□□□ 0.9
PPP4R3AQ6IN85 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.9
PPP4R3AQ6IN85 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
PPP4R3AQ6IN85 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
PPP4R3AQ6IN85 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC20.64■□□□□ 0.9
PPP4R3AQ6IN85 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PPP4R3AQ6IN85 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
PPP4R3AQ6IN85 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC20.64■□□□□ 0.89
PPP4R3AQ6IN85 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PPP4R3AQ6IN85 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
PPP4R3AQ6IN85 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC20.64■□□□□ 0.89
PPP4R3AQ6IN85 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
PPP4R3AQ6IN85 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
PPP4R3AQ6IN85 ARMC10P1-201ENST00000313754 855 ntBASIC20.64■□□□□ 0.89
PPP4R3AQ6IN85 IGHGP-201ENST00000390555 1178 ntBASIC20.64■□□□□ 0.89
PPP4R3AQ6IN85 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
PPP4R3AQ6IN85 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
PPP4R3AQ6IN85 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC20.64■□□□□ 0.89
PPP4R3AQ6IN85 AP003733.1-201ENST00000491725 852 ntBASIC20.64■□□□□ 0.89
PPP4R3AQ6IN85 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC20.64■□□□□ 0.89
PPP4R3AQ6IN85 PTK2-216ENST00000519881 863 ntTSL 3 BASIC20.64■□□□□ 0.89
PPP4R3AQ6IN85 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC20.64■□□□□ 0.89
PPP4R3AQ6IN85 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC20.64■□□□□ 0.89
PPP4R3AQ6IN85 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PPP4R3AQ6IN85 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
PPP4R3AQ6IN85 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
PPP4R3AQ6IN85 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC20.64■□□□□ 0.89
PPP4R3AQ6IN85 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
PPP4R3AQ6IN85 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PPP4R3AQ6IN85 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC20.64■□□□□ 0.89
PPP4R3AQ6IN85 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC20.64■□□□□ 0.89
PPP4R3AQ6IN85 AC135050.7-201ENST00000624508 2218 ntBASIC20.63■□□□□ 0.89
PPP4R3AQ6IN85 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC20.63■□□□□ 0.89
PPP4R3AQ6IN85 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC20.63■□□□□ 0.89
PPP4R3AQ6IN85 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PPP4R3AQ6IN85 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC20.63■□□□□ 0.89
PPP4R3AQ6IN85 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
PPP4R3AQ6IN85 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC20.63■□□□□ 0.89
PPP4R3AQ6IN85 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PPP4R3AQ6IN85 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
PPP4R3AQ6IN85 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PPP4R3AQ6IN85 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
PPP4R3AQ6IN85 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC20.63■□□□□ 0.89
PPP4R3AQ6IN85 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC20.63■□□□□ 0.89
PPP4R3AQ6IN85 PPOX-214ENST00000535223 664 ntTSL 3 BASIC20.63■□□□□ 0.89
PPP4R3AQ6IN85 CD320-202ENST00000537716 1119 ntTSL 2 BASIC20.63■□□□□ 0.89
PPP4R3AQ6IN85 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC20.63■□□□□ 0.89
PPP4R3AQ6IN85 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC20.63■□□□□ 0.89
PPP4R3AQ6IN85 NT5C-211ENST00000582170 653 ntTSL 3 BASIC20.63■□□□□ 0.89
PPP4R3AQ6IN85 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC20.63■□□□□ 0.89
PPP4R3AQ6IN85 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PPP4R3AQ6IN85 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
PPP4R3AQ6IN85 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PPP4R3AQ6IN85 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PPP4R3AQ6IN85 AC093010.1-201ENST00000473625 1624 ntBASIC20.63■□□□□ 0.89
PPP4R3AQ6IN85 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PPP4R3AQ6IN85 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC20.63■□□□□ 0.89
PPP4R3AQ6IN85 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
PPP4R3AQ6IN85 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PPP4R3AQ6IN85 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PPP4R3AQ6IN85 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
PPP4R3AQ6IN85 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PPP4R3AQ6IN85 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC20.63■□□□□ 0.89
PPP4R3AQ6IN85 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
PPP4R3AQ6IN85 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PPP4R3AQ6IN85 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC20.62■□□□□ 0.89
PPP4R3AQ6IN85 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC20.62■□□□□ 0.89
PPP4R3AQ6IN85 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PPP4R3AQ6IN85 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC20.62■□□□□ 0.89
PPP4R3AQ6IN85 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC20.62■□□□□ 0.89
PPP4R3AQ6IN85 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PPP4R3AQ6IN85 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
PPP4R3AQ6IN85 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
PPP4R3AQ6IN85 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
PPP4R3AQ6IN85 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC20.62■□□□□ 0.89
PPP4R3AQ6IN85 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC20.62■□□□□ 0.89
PPP4R3AQ6IN85 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC20.62■□□□□ 0.89
PPP4R3AQ6IN85 CNP-204ENST00000472031 1019 ntTSL 2 BASIC20.62■□□□□ 0.89
PPP4R3AQ6IN85 RNF126P1-202ENST00000569893 925 ntBASIC20.62■□□□□ 0.89
PPP4R3AQ6IN85 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC20.62■□□□□ 0.89
PPP4R3AQ6IN85 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
PPP4R3AQ6IN85 GXYLT1P4-201ENST00000613576 1192 ntBASIC20.62■□□□□ 0.89
PPP4R3AQ6IN85 AC116407.4-201ENST00000623319 1061 ntBASIC20.62■□□□□ 0.89
PPP4R3AQ6IN85 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PPP4R3AQ6IN85 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms