Protein–RNA interactions for Protein: Q5VTL8

PRPF38B, Pre-mRNA-splicing factor 38B, humanhuman

Known RBP Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38BQ5VTL8 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
PRPF38BQ5VTL8 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
PRPF38BQ5VTL8 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC19.61■□□□□ 0.73
PRPF38BQ5VTL8 AC026310.3-201ENST00000625186 2373 ntBASIC19.61■□□□□ 0.73
PRPF38BQ5VTL8 CD9-202ENST00000382515 1229 ntTSL 5 BASIC19.61■□□□□ 0.73
PRPF38BQ5VTL8 PRYP5-201ENST00000451909 266 ntBASIC19.61■□□□□ 0.73
PRPF38BQ5VTL8 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PRPF38BQ5VTL8 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC19.61■□□□□ 0.73
PRPF38BQ5VTL8 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
PRPF38BQ5VTL8 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC19.61■□□□□ 0.73
PRPF38BQ5VTL8 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC19.61■□□□□ 0.73
PRPF38BQ5VTL8 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC19.61■□□□□ 0.73
PRPF38BQ5VTL8 AC004790.2-201ENST00000623588 572 ntBASIC19.61■□□□□ 0.73
PRPF38BQ5VTL8 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC19.61■□□□□ 0.73
PRPF38BQ5VTL8 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
PRPF38BQ5VTL8 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC19.61■□□□□ 0.73
PRPF38BQ5VTL8 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
PRPF38BQ5VTL8 AL512353.2-201ENST00000448759 1962 ntBASIC19.61■□□□□ 0.73
PRPF38BQ5VTL8 AC025580.3-201ENST00000617932 1424 ntBASIC19.6■□□□□ 0.73
PRPF38BQ5VTL8 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
PRPF38BQ5VTL8 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PRPF38BQ5VTL8 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC19.6■□□□□ 0.73
PRPF38BQ5VTL8 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
PRPF38BQ5VTL8 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
PRPF38BQ5VTL8 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC19.6■□□□□ 0.73
PRPF38BQ5VTL8 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC19.6■□□□□ 0.73
PRPF38BQ5VTL8 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
PRPF38BQ5VTL8 WRB-204ENST00000398753 699 ntTSL 3 BASIC19.6■□□□□ 0.73
PRPF38BQ5VTL8 AC092506.1-202ENST00000401022 528 ntBASIC19.6■□□□□ 0.73
PRPF38BQ5VTL8 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
PRPF38BQ5VTL8 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
PRPF38BQ5VTL8 IGHV3-42-201ENST00000520410 361 ntBASIC19.6■□□□□ 0.73
PRPF38BQ5VTL8 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC19.6■□□□□ 0.73
PRPF38BQ5VTL8 NAA38-206ENST00000576384 424 ntTSL 2 BASIC19.6■□□□□ 0.73
PRPF38BQ5VTL8 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC19.6■□□□□ 0.73
PRPF38BQ5VTL8 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PRPF38BQ5VTL8 AC008667.4-201ENST00000607370 168 ntBASIC19.6■□□□□ 0.73
PRPF38BQ5VTL8 AC010654.1-201ENST00000615722 808 ntBASIC19.6■□□□□ 0.73
PRPF38BQ5VTL8 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC19.6■□□□□ 0.73
PRPF38BQ5VTL8 AC073592.4-201ENST00000623827 446 ntBASIC19.6■□□□□ 0.73
PRPF38BQ5VTL8 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC19.6■□□□□ 0.73
PRPF38BQ5VTL8 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC19.6■□□□□ 0.73
PRPF38BQ5VTL8 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PRPF38BQ5VTL8 MOK-225ENST00000522867 1883 ntTSL 5 BASIC19.6■□□□□ 0.73
PRPF38BQ5VTL8 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC19.6■□□□□ 0.73
PRPF38BQ5VTL8 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
PRPF38BQ5VTL8 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC19.6■□□□□ 0.73
PRPF38BQ5VTL8 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PRPF38BQ5VTL8 FO538757.1-201ENST00000623083 1397 ntBASIC19.59■□□□□ 0.73
PRPF38BQ5VTL8 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC19.59■□□□□ 0.73
PRPF38BQ5VTL8 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
PRPF38BQ5VTL8 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
PRPF38BQ5VTL8 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
PRPF38BQ5VTL8 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC19.59■□□□□ 0.73
PRPF38BQ5VTL8 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
PRPF38BQ5VTL8 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
PRPF38BQ5VTL8 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PRPF38BQ5VTL8 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
PRPF38BQ5VTL8 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
PRPF38BQ5VTL8 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
PRPF38BQ5VTL8 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC19.59■□□□□ 0.73
PRPF38BQ5VTL8 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PRPF38BQ5VTL8 MTCL1P1-201ENST00000446207 792 ntBASIC19.59■□□□□ 0.73
PRPF38BQ5VTL8 AL512356.2-201ENST00000546955 174 ntBASIC19.59■□□□□ 0.73
PRPF38BQ5VTL8 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
PRPF38BQ5VTL8 MIR6805-201ENST00000615055 62 ntBASIC19.59■□□□□ 0.73
PRPF38BQ5VTL8 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
PRPF38BQ5VTL8 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC19.59■□□□□ 0.73
PRPF38BQ5VTL8 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
PRPF38BQ5VTL8 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PRPF38BQ5VTL8 PLK5-205ENST00000642079 1969 ntBASIC19.59■□□□□ 0.73
PRPF38BQ5VTL8 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PRPF38BQ5VTL8 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
PRPF38BQ5VTL8 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
PRPF38BQ5VTL8 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
PRPF38BQ5VTL8 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC19.58■□□□□ 0.73
PRPF38BQ5VTL8 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC19.58■□□□□ 0.73
PRPF38BQ5VTL8 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
PRPF38BQ5VTL8 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
PRPF38BQ5VTL8 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
PRPF38BQ5VTL8 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC19.58■□□□□ 0.73
PRPF38BQ5VTL8 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
PRPF38BQ5VTL8 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
PRPF38BQ5VTL8 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC19.58■□□□□ 0.72
PRPF38BQ5VTL8 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC19.58■□□□□ 0.72
PRPF38BQ5VTL8 AC125807.1-201ENST00000483097 614 ntBASIC19.58■□□□□ 0.72
PRPF38BQ5VTL8 SERBP1P5-201ENST00000510079 1181 ntBASIC19.58■□□□□ 0.72
PRPF38BQ5VTL8 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
PRPF38BQ5VTL8 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC19.58■□□□□ 0.72
PRPF38BQ5VTL8 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
PRPF38BQ5VTL8 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC19.58■□□□□ 0.72
PRPF38BQ5VTL8 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC19.58■□□□□ 0.72
PRPF38BQ5VTL8 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
PRPF38BQ5VTL8 AC008687.5-201ENST00000593746 558 ntBASIC19.58■□□□□ 0.72
PRPF38BQ5VTL8 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC19.58■□□□□ 0.72
PRPF38BQ5VTL8 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC19.58■□□□□ 0.72
PRPF38BQ5VTL8 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
PRPF38BQ5VTL8 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC19.58■□□□□ 0.72
PRPF38BQ5VTL8 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
PRPF38BQ5VTL8 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 56.4 ms