Protein–RNA interactions for Protein: Q3KNV8

PCGF3, Polycomb group RING finger protein 3, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF3Q3KNV8 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC16.14■□□□□ 0.17
PCGF3Q3KNV8 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PCGF3Q3KNV8 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
PCGF3Q3KNV8 KRT18P21-201ENST00000515767 1272 ntBASIC16.14■□□□□ 0.17
PCGF3Q3KNV8 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC16.14■□□□□ 0.17
PCGF3Q3KNV8 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC16.14■□□□□ 0.17
PCGF3Q3KNV8 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC16.14■□□□□ 0.17
PCGF3Q3KNV8 P4HB-223ENST00000576390 439 ntTSL 4 BASIC16.14■□□□□ 0.17
PCGF3Q3KNV8 FAM87A-204ENST00000613235 858 ntBASIC16.14■□□□□ 0.17
PCGF3Q3KNV8 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
PCGF3Q3KNV8 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC16.14■□□□□ 0.17
PCGF3Q3KNV8 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
PCGF3Q3KNV8 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
PCGF3Q3KNV8 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
PCGF3Q3KNV8 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
PCGF3Q3KNV8 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PCGF3Q3KNV8 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PCGF3Q3KNV8 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC16.14■□□□□ 0.17
PCGF3Q3KNV8 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC16.14■□□□□ 0.17
PCGF3Q3KNV8 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
PCGF3Q3KNV8 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
PCGF3Q3KNV8 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
PCGF3Q3KNV8 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
PCGF3Q3KNV8 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PCGF3Q3KNV8 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
PCGF3Q3KNV8 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PCGF3Q3KNV8 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
PCGF3Q3KNV8 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC16.13■□□□□ 0.17
PCGF3Q3KNV8 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC16.13■□□□□ 0.17
PCGF3Q3KNV8 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
PCGF3Q3KNV8 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC16.13■□□□□ 0.17
PCGF3Q3KNV8 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
PCGF3Q3KNV8 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC16.13■□□□□ 0.17
PCGF3Q3KNV8 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC16.13■□□□□ 0.17
PCGF3Q3KNV8 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC16.13■□□□□ 0.17
PCGF3Q3KNV8 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC16.13■□□□□ 0.17
PCGF3Q3KNV8 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC16.13■□□□□ 0.17
PCGF3Q3KNV8 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PCGF3Q3KNV8 GNAS-203ENST00000306120 1878 ntBASIC16.13■□□□□ 0.17
PCGF3Q3KNV8 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PCGF3Q3KNV8 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PCGF3Q3KNV8 LINC00896-202ENST00000609602 2128 ntBASIC16.13■□□□□ 0.17
PCGF3Q3KNV8 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
PCGF3Q3KNV8 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
PCGF3Q3KNV8 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
PCGF3Q3KNV8 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PCGF3Q3KNV8 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
PCGF3Q3KNV8 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
PCGF3Q3KNV8 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC16.12■□□□□ 0.17
PCGF3Q3KNV8 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PCGF3Q3KNV8 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PCGF3Q3KNV8 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
PCGF3Q3KNV8 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC16.12■□□□□ 0.17
PCGF3Q3KNV8 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC16.12■□□□□ 0.17
PCGF3Q3KNV8 FST-202ENST00000396947 2538 ntTSL 5 BASIC16.12■□□□□ 0.17
PCGF3Q3KNV8 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC16.12■□□□□ 0.17
PCGF3Q3KNV8 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PCGF3Q3KNV8 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PCGF3Q3KNV8 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC16.12■□□□□ 0.17
PCGF3Q3KNV8 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
PCGF3Q3KNV8 GAS2L1P1-201ENST00000420145 1480 ntBASIC16.12■□□□□ 0.17
PCGF3Q3KNV8 TERF1P1-201ENST00000311003 1181 ntBASIC16.12■□□□□ 0.17
PCGF3Q3KNV8 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC16.12■□□□□ 0.17
PCGF3Q3KNV8 AC005521.1-201ENST00000393351 872 ntBASIC16.12■□□□□ 0.17
PCGF3Q3KNV8 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
PCGF3Q3KNV8 RCN1P1-201ENST00000400413 996 ntBASIC16.12■□□□□ 0.17
PCGF3Q3KNV8 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC16.12■□□□□ 0.17
PCGF3Q3KNV8 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC16.12■□□□□ 0.17
PCGF3Q3KNV8 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
PCGF3Q3KNV8 TK2-213ENST00000563369 882 ntTSL 5 BASIC16.12■□□□□ 0.17
PCGF3Q3KNV8 AC134043.2-201ENST00000624206 2238 ntBASIC16.12■□□□□ 0.17
PCGF3Q3KNV8 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PCGF3Q3KNV8 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PCGF3Q3KNV8 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
PCGF3Q3KNV8 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC16.12■□□□□ 0.17
PCGF3Q3KNV8 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC16.12■□□□□ 0.17
PCGF3Q3KNV8 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PCGF3Q3KNV8 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC16.12■□□□□ 0.17
PCGF3Q3KNV8 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC16.12■□□□□ 0.17
PCGF3Q3KNV8 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC16.12■□□□□ 0.17
PCGF3Q3KNV8 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PCGF3Q3KNV8 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PCGF3Q3KNV8 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PCGF3Q3KNV8 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PCGF3Q3KNV8 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC16.11■□□□□ 0.17
PCGF3Q3KNV8 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
PCGF3Q3KNV8 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC16.11■□□□□ 0.17
PCGF3Q3KNV8 AC106820.2-201ENST00000563775 3264 ntBASIC16.11■□□□□ 0.17
PCGF3Q3KNV8 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC16.11■□□□□ 0.17
PCGF3Q3KNV8 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC16.11■□□□□ 0.17
PCGF3Q3KNV8 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
PCGF3Q3KNV8 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC16.11■□□□□ 0.17
PCGF3Q3KNV8 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
PCGF3Q3KNV8 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PCGF3Q3KNV8 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PCGF3Q3KNV8 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
PCGF3Q3KNV8 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
PCGF3Q3KNV8 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
PCGF3Q3KNV8 TMPOP1-202ENST00000424642 1267 ntBASIC16.11■□□□□ 0.17
PCGF3Q3KNV8 PHB2-202ENST00000440277 996 ntTSL 5 BASIC16.11■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 71.9 ms