Protein–RNA interactions for Protein: Q15878

CACNA1E, Voltage-dependent R-type calcium channel subunit alpha-1E, humanhuman

Predictions only

Length 2,313 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1EQ15878 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC17.65■□□□□ 0.42
CACNA1EQ15878 RPS2P28-201ENST00000314255 741 ntBASIC17.65■□□□□ 0.42
CACNA1EQ15878 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CACNA1EQ15878 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CACNA1EQ15878 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CACNA1EQ15878 AC105339.3-201ENST00000560043 636 ntBASIC17.65■□□□□ 0.42
CACNA1EQ15878 MTDHP4-201ENST00000600287 670 ntBASIC17.65■□□□□ 0.42
CACNA1EQ15878 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC17.65■□□□□ 0.42
CACNA1EQ15878 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC17.65■□□□□ 0.42
CACNA1EQ15878 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.42
CACNA1EQ15878 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.42
CACNA1EQ15878 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CACNA1EQ15878 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CACNA1EQ15878 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
CACNA1EQ15878 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CACNA1EQ15878 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
CACNA1EQ15878 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CACNA1EQ15878 UNC93B6-202ENST00000528242 690 ntBASIC17.64■□□□□ 0.41
CACNA1EQ15878 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC17.64■□□□□ 0.41
CACNA1EQ15878 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC17.64■□□□□ 0.41
CACNA1EQ15878 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
CACNA1EQ15878 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CACNA1EQ15878 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CACNA1EQ15878 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CACNA1EQ15878 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC17.64■□□□□ 0.41
CACNA1EQ15878 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CACNA1EQ15878 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CACNA1EQ15878 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
CACNA1EQ15878 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
CACNA1EQ15878 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC17.64■□□□□ 0.41
CACNA1EQ15878 AC079776.2-201ENST00000641154 1609 ntBASIC17.64■□□□□ 0.41
CACNA1EQ15878 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC17.64■□□□□ 0.41
CACNA1EQ15878 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC17.64■□□□□ 0.41
CACNA1EQ15878 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC17.64■□□□□ 0.41
CACNA1EQ15878 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
CACNA1EQ15878 ETFA-208ENST00000559602 792 ntTSL 3 BASIC17.64■□□□□ 0.41
CACNA1EQ15878 AC040169.1-201ENST00000565382 521 ntBASIC17.64■□□□□ 0.41
CACNA1EQ15878 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC17.64■□□□□ 0.41
CACNA1EQ15878 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CACNA1EQ15878 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CACNA1EQ15878 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
CACNA1EQ15878 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC17.64■□□□□ 0.41
CACNA1EQ15878 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC17.63■□□□□ 0.41
CACNA1EQ15878 AC002310.6-201ENST00000624451 1377 ntBASIC17.63■□□□□ 0.41
CACNA1EQ15878 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CACNA1EQ15878 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC17.63■□□□□ 0.41
CACNA1EQ15878 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CACNA1EQ15878 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
CACNA1EQ15878 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CACNA1EQ15878 AC007967.2-201ENST00000432613 625 ntBASIC17.63■□□□□ 0.41
CACNA1EQ15878 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC17.63■□□□□ 0.41
CACNA1EQ15878 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
CACNA1EQ15878 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC17.63■□□□□ 0.41
CACNA1EQ15878 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC17.63■□□□□ 0.41
CACNA1EQ15878 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
CACNA1EQ15878 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
CACNA1EQ15878 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CACNA1EQ15878 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CACNA1EQ15878 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CACNA1EQ15878 AL035633.1-201ENST00000406139 838 ntBASIC17.63■□□□□ 0.41
CACNA1EQ15878 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CACNA1EQ15878 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC17.63■□□□□ 0.41
CACNA1EQ15878 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CACNA1EQ15878 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
CACNA1EQ15878 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC17.62■□□□□ 0.41
CACNA1EQ15878 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC17.62■□□□□ 0.41
CACNA1EQ15878 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC17.62■□□□□ 0.41
CACNA1EQ15878 KIRREL3-AS3-201ENST00000404882 831 ntBASIC17.62■□□□□ 0.41
CACNA1EQ15878 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC17.62■□□□□ 0.41
CACNA1EQ15878 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC17.62■□□□□ 0.41
CACNA1EQ15878 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CACNA1EQ15878 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC17.62■□□□□ 0.41
CACNA1EQ15878 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC17.62■□□□□ 0.41
CACNA1EQ15878 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC17.62■□□□□ 0.41
CACNA1EQ15878 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CACNA1EQ15878 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CACNA1EQ15878 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CACNA1EQ15878 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
CACNA1EQ15878 LINC01126-201ENST00000623515 1646 ntBASIC17.62■□□□□ 0.41
CACNA1EQ15878 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CACNA1EQ15878 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
CACNA1EQ15878 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CACNA1EQ15878 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC17.62■□□□□ 0.41
CACNA1EQ15878 FUOM-202ENST00000368551 628 ntTSL 3 BASIC17.61■□□□□ 0.41
CACNA1EQ15878 CYMP-203ENST00000474680 1263 ntBASIC17.61■□□□□ 0.41
CACNA1EQ15878 AC092910.1-201ENST00000482027 1129 ntBASIC17.61■□□□□ 0.41
CACNA1EQ15878 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
CACNA1EQ15878 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC17.61■□□□□ 0.41
CACNA1EQ15878 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC17.61■□□□□ 0.41
CACNA1EQ15878 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC17.61■□□□□ 0.41
CACNA1EQ15878 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC17.61■□□□□ 0.41
CACNA1EQ15878 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CACNA1EQ15878 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC17.61■□□□□ 0.41
CACNA1EQ15878 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
CACNA1EQ15878 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CACNA1EQ15878 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC17.61■□□□□ 0.41
CACNA1EQ15878 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
CACNA1EQ15878 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
CACNA1EQ15878 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC17.61■□□□□ 0.41
CACNA1EQ15878 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC17.61■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 57.1 ms